Ailuropoda melanoleuca (giant panda): 100468260
Help
Entry
100468260 CDS
T01329
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03030
DNA replication
aml03410
Base excision repair
aml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100468260 (POLE)
03410 Base excision repair
100468260 (POLE)
03420 Nucleotide excision repair
100468260 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aml03032
]
100468260 (POLE)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100468260 (POLE)
Enzymes [BR:
aml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100468260 (POLE)
DNA replication proteins [BR:
aml03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
100468260 (POLE)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
100468260 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
100468260
NCBI-ProteinID:
XP_034493783
LinkDB
All DBs
Position
12:398926..440113
Genome browser
AA seq
2298 aa
AA seq
DB search
MDRVMFSEDRIALLLSFRDDGSSSSVSALKRLERSQWTDKMDSRFGFERLKEPGEKTGWL
VNMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIAARKGCEREVSSFLSKK
FQGKIAKIETVPKEDLDLPNHLVGLKRSYIKLSFNTVEDLVRVRKDISPSVKKNREQGHA
SDTYTAMLSSVLQGGSVVIDEEEASKKVTDQLDNVVDMREYDVPYHIRLSIDLKIHVAHW
YNVRYRGSAFPVEISRRDDLVERPDPVVLAFDIETTKLPLKFPDPETDQIMMISYMIDGQ
GYLITNREIVSDDVEDFEFTPKPEYDGPFCVFNEPDEGHLIQRWFEHVQETKPTIMVTYN
GDFFDWPFVEARAAIHGLSMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHN
LKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCT
IIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYVGGH
VEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVCDQI
KTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACDFNKPGADC
QRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTAEGPPRAFHELSREEQAKYEKRRL
SDYCRKAYKKIHVTRVEERLTTVCQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAM
ELGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCFTGANII
TQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIMVKE
GFTNDQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDG
SLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAAN
MPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRK
PEGSPVTERAIPLAIFQAEPMVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSAIQK
IITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVCKQKKISELFVLEGRRQVGTAQAPEG
TQSLGAPDVEDFGLVKPLHSAVPVATKRKRILWESQEESQDLELTVPWQEILGQPPALGT
TQEEWLVWLRFHKKKWQLQARQRLARKKRRRVXVAEGGPPPGTVRDRPAAGLGSFLRRTA
RSILDLPWQIVQISETSQAGLFRLWAVISSDLHCIKLSVPRVFYVNQRVAKAEEGPSYRK
VSRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQLGC
VCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHLYLYHHAQGHKALFGLF
VPSQRRASVFVLDTVRSNQMPSLSALYSAEHSLLMERVGPELLPPPKHTFEVRAETDMKT
ICRAIQRSLLAYKEERRGPTLIAVQSNWELKRLASEVPVLEEFPLVPVHVADKISYGVLD
WQRLGARRMIRHYLSLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRHSHV
LWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINYPGCYSTVCVELDIQNLAVNTILQSH
HINDMEGADSVGISFDVIQQASLEDMITGNQAASTLASYDETALCSSTFRILKSMVVGWV
REITQYRNIYADSQVMHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLGSSV
VYANFNRIILCTRKRRIEDAIAYVEYVTSSIHSKEIFHSLTISFSRCWEFLLWMDPSNYG
GIKGDVPSRIHCGQEDSPKRGGEEEEEEGAQEPDVEDKLENSWNIVQFLPQAASCQSSFL
MIVSAYVVAVYHSMKEELRRSAPGATPLRRRGPSQLSQDAPAAGALPGEHALAAAWGPRV
PQAQVAAAAAAAAAGVVPMPSDRPRRRVEHVGLSQSPLEQTETARLGTGAGPLRMGPCTE
RPLMWMRPLPLPDPPAGKGRGEVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPC
RSYVLPEVICRSCNFCRDLDLCKESSSSQDGSVLPQWLCSNCQVAYDTSVIEMALVEALQ
KKLMAFTLQDLVCLKCRGVKEANMPVYCSCAGGFALTIHTKVFMEQIGIFQNIAQHYGMS
YLLETLEWLLQKSPQLGR
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atggatagagtgatgttcagtgaagacaggattgccctcctcctttcattcagggatgat
ggctcctcttcctctgtctcggctcttaagcgcctggagcgcagtcagtggacggataag
atggattcgcggtttggatttgagaggctcaaggagcccggcgagaagacgggctggctc
gtcaacatgcaccctactgagattttagatgaagacaaacgcttagtcagtgcagtggat
tactactttattcaggatgatgggagcagatttaaggtggccttgccctacaagccatat
ttctacattgcagccagaaagggttgtgaacgagaagtttcatctttcctctccaagaag
tttcagggtaaaattgctaaaatagagactgtccccaaagaggatctggacttgccaaat
cacttggtgggtttgaagcgaagttacattaagctgtccttcaataccgtggaggatctt
gtcagagtgaggaaggacatctccccttctgtgaagaagaaccgggagcagggccatgcc
agtgatacgtacacagctatgctctccagtgttctgcaagggggcagtgtggttatcgac
gaagaggaagcctctaagaaggtcaccgaccagctggacaacgttgtggatatgcgagag
tatgacgtgccctaccacatccgcctctccatcgacctgaagatccacgtggctcactgg
tacaacgtcagataccgaggaagtgcctttcccgtggaaatctcccgacgagatgacctt
gttgaacgacccgaccctgtggttttggcatttgacatcgagacgaccaaactgcccctc
aagtttcccgaccccgagaccgaccagattatgatgatttcctatatgattgatggtcag
ggttacctcatcaccaacagggagatcgtttcagacgacgttgaagattttgagttcacc
cccaagccggagtacgacggacctttttgtgtcttcaatgaaccagacgagggtcatcta
atccagagatggtttgaacatgtccaggagaccaaacccaccatcatggtcacctacaac
ggcgatttttttgactggccgtttgtggaggccagagcagcgatccatggactgagcatg
taccaggagatagggttccagaaggacagccagggggagtacaaggcatcccagtgcatt
cacatggactgtctcaggtgggtgaagagggacagttaccttcctgtgggcagccacaac
ctcaaggcagctgcgaaagccaagctgggctacgaccccgtggagctggaccccgaggac
atgtgccggatggccaccgagcagccccagactctggccacgtactcggtgtcggatgcg
gtggccacatactacctgtacatgaagtacgtgcacccctttatattcgccctctgcacc
atcatccccatggagcctgatgaggtgctgcggaagggctccgggactctgtgtgaggcc
ttgttgatggtgcaggccttccatgccaacatcatcttccccaacaagcaggagcaggag
tttaacaagctgacagatgatggtcacgtgttggactccgagacctatgtgggtggccac
gtggaggcccttgagtcaggcgtgtttcgcagcgacatcccctgccggttcaggatgaat
cctgctgcctttgacttcctgctgcagcgggtggagaaaaccatgcgtcacgccatcgag
gaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgtgatcagatt
aagaccaagctcacctccctgaaagatgttccgaacagaatagagtgtccccttatctac
cacctggacgtgggggccatgtaccccaacatcatcctgacgaaccgtctgcagccgtct
gccgtggtggacgaggccacctgtgctgcctgtgacttcaacaagcccggagcagactgc
cagaggaagatggcctggcagtggaggggcgagttcatgccagccagccgcagcgagtac
catcggatccagcaccagctggagtcggagaaattccctcccttgactgcagagggtccg
ccccgggcctttcacgagctgtcccgcgaggagcaggctaaatacgagaagcggaggctg
tcagattactgccggaaggcgtacaagaagatccacgtgaccagggtggaggagcgcctc
accaccgtctgccagcgggagaactctttctacgtggacacggtgcgcgccttccgagac
aggcgctacgagttcaagggtctccacaaggtgtggaagaagaagctctccgcggccatg
gagctgggcgacgcggccgaggtaaagcgctgcaagaatatggaggtcctgtacgactcg
ctgcagctggcacacaagtgcatcctcaactccttctacggctacgtcatgcgcagaggg
gcccgctggtactccatggagatggcaggcatcgtctgcttcacgggggccaacatcatc
acccaggcgcgggagctgatcgagcagatcgggaggcccctggagctggacacagatgga
atatggtgcgtcctgcccaacagcttccctgaaaactttgtcatcaagacgaccagtgtg
aaaaagcccaaggtgaccatttcctaccccggggccatgttaaacatcatggtcaaggaa
ggcttcaccaatgatcagtaccaggagctgactgagccgtcctcactcacctatgtcacc
cgctcagagaacagcatctttttcgaggttgacggaccgtaccttgccatgatccttcca
gcctccaaggaagaaggcaagaaactgaagaagagatatgccgtcttcaatgaggatggc
tccctggctgagctaaagggcttcgagatcaagcgccgaggggagctgcagctgatcaag
atcttccagtcctccgtgttcgaggccttccttaagggcagcacgctggaagaagtgtat
ggctctgttgccaaggtggctgattactggctggatgtgctgtacagcaaagcagccaac
atgcccgattctgagctgtttgagctgatctctgagaaccgctccatgtctcggaagctg
gaagattatggggagcagaagtccacgtccatcagcacagccaagcgcctggctgagttc
ctgggagatcagatggtgaaggacgcggggctgagctgccgctacattatctcccggaag
cccgaggggtctcccgtcacagagagggccatcccgctagccattttccaggccgagccc
atggtgaggaagcactttctccggaaatggcttaagagttcttcgctccaagattttgat
attcggacaattctggattgggactactacatcgagcgtctggggagtgccatacagaag
atcatcacaatcccggcggctctgcagcaggtgaagaacccagtgccacgcgtcaagcac
cccgactggctgcacaagaagcttctggagaagaacgatgtctgcaagcagaagaagatc
agtgagctctttgtcctcgagggccggagacaggtgggcacggcccaggctccagaaggc
acgcagagccttggtgctcctgacgtggaggattttggccttgtgaagccactgcactcg
gcagttcctgttgccacgaagaggaagcgcatcctctgggagagccaggaggagtcgcag
gacctggagctgacggtgccctggcaggaaatcttggggcagcctccggccctcggaacc
acccaggaagagtggctggtctggctccggttccataagaagaagtggcagctgcaggcc
cggcagcggctggctcgcaagaagaggcggcgtgtgnnggtggcggagggtggacctccg
cccgggaccgtccgagacaggcccgccgccgggctggggagcttcttgcgaaggaccgcc
cgcagcatcttggaccttccgtggcagattgtgcagatcagtgagaccagccaggcgggc
ctgttcaggctgtgggccgtcatcagcagcgacttgcactgcatcaagctgagcgtcccc
cgcgtgttctatgtcaaccagcgggtggccaaagccgaggaggggccttcatatcgcaag
gtcagccgtgtccttccgcgctccaacatggtctacaacctctatgagtactcggtgccc
gaggacatgtaccaggaacacatcaacgagatcaacaccgagttgtcagccccggacatt
gagggcgtgtatgagactcaggtcccgttattgttccgggccctggtgcagctgggctgt
gtgtgtgtggtcaataaacagctggtgaggcacctttcaggctgggaggcggagaccttt
gctctcgagcacctggagatgcgctctctggcccagttcagctacctggaaccaggcagc
atccgccacctctacctgtaccatcacgcgcagggccacaaagcgctctttggcttgttc
gtgccctcccagcgcagagcgtctgtgtttgtgttggacaccgtgcgaagcaaccagatg
cccagcctcagcgccctgtactcagccgagcacagcctcctgatggagagagtgggtcct
gagctcctgcctccccccaaacacactttcgaggttcgggccgaaacggacatgaagacc
atctgcagggccatccagcgctccctgctggcttacaaagaggagcgccgggggcccaca
ctcatcgccgtgcagtccaactgggagctgaagaggctggctagcgaggttcccgtcctg
gaggagttcccgctggtgcccgtccacgtggccgataagatcagctatggagtcctggac
tggcagcgcctcggggcccggcgcatgatccgccactatctcagcctcgacacctgtctg
tcacaggctttcgagatgagccggtacttccacatccccattggtaatctgcctgaggac
atctccacctttggctccgacctcttcttcgcccgccacctccagcgccacagccacgtg
ctctggctgtcccctacatcacgccctgacctgggcggcaaggaggccgatgacaatcgc
ctcgtcatggagtttgatgaccaggccagtgtggagatcaactatccaggctgctactcc
acagtgtgcgtggagctggacatccagaacctggctgtgaacaccatcctgcagtcccac
catatcaatgacatggaaggggccgacagtgtgggcatcagcttcgatgtgatccagcag
gcctccctggaggacatgatcaccggcaatcaggccgccagcaccctggcaagctacgac
gagacagcgctgtgctccagcaccttcaggatcctgaagagcatggtggtgggctgggtg
agagagatcacacaataccgcaatatctatgcggacagccaggtgatgcacttctaccgc
tggctgcggtcgccgtcctcgctgctgcacgaccctgctctgcaccgcacgctccacagc
atgatgaagaaactctttctgcagctcattgccgagttcaagcgcttggggtcatctgtc
gtctatgccaacttcaaccgcatcatcctctgcacgagaaagcggcggattgaggatgcc
attgcctacgtggagtacgtcaccagcagcatccattctaaagagatcttccattccttg
acaatttcgttctctcggtgctgggaatttcttctgtggatggatccctccaactatggt
gggatcaaaggcgatgttccatctcgtattcactgtggacaggaagactccccaaaacgg
ggcggagaggaggaggaggaggaaggcgcacaggagcccgatgtggaggacaagctggag
aacagctggaacatcgtgcagttcctgccgcaggcggcctcctgccagagctccttcctc
atgatcgtgtcagcctacgtggtggccgtgtaccacagcatgaaggaggagctgcggcgc
agcgcccccggggccacgcccctgagacgccgggggcccagccagctgtcccaggacgcc
ccggcggccggcgcccttcccggtgagcacgccctcgcagcggcctggggtccccgcgtg
ccccaggctcaggtggccgctgctgccgctgctgccgctgcaggcgtagttccgatgccg
tctgaccgccctagacgacgggtagagcatgtcggtctgtcgcagagtcccctggagcag
acagagaccgcgagacttgggaccggggcagggcctctgcgcatggggccctgcactgag
agaccactgatgtggatgcggccactccccctccccgaccctccagcaggaaaagggagg
ggtgaggttctgtctctggacacgaacatcacaaaccaggtgaacaagttgaaccgggac
ctgcttcgcctggtggacgtgggcgagttctcagaggaggcccagttccgagacccctgc
cgttcctacgtgctcccagaggtcatctgccgcagctgtaacttctgccgggacctggac
ctgtgcaaagagtcctcctcctctcaggacgggtccgtgctgcctcagtggctctgctcc
aactgtcaggttgcctacgacacctcagtcatcgagatggctctggtggaagccctgcag
aagaagctgatggccttcactctgcaggacctggtctgcctgaagtgccggggtgtgaag
gaggccaacatgcctgtgtactgcagctgtgcggggggcttcgccctcaccatccacacc
aaggtcttcatggagcagattggaatcttccagaacatcgcccagcactacggcatgtcc
tacctcctggagaccctggagtggctgctgcagaagagccctcagctgggccgttag
DBGET
integrated database retrieval system
