KEGG   Ailuropoda melanoleuca (giant panda): 100468550
Entry
100468550         CDS       T01329                                 
Name
(RefSeq) protocadherin beta-6
  KO
K16494  protocadherin beta
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    100468550
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Protocadherins
   100468550
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Cadherin_4
Other DBs
NCBI-GeneID: 100468550
NCBI-ProteinID: XP_002912599
Ensembl: ENSAMEG00000024824
LinkDB
Position
3:28974059..28978229
AA seq 816 aa
MVDVLMGTGKGFFPLGSDIMEMARTKVHRKKRQVAILIIWMLLWEAGSESIQYSVLEESE
RGTFVANLTKDLGLGRGELAARGAQVVFKGNRQHLQLDPQTHDLLLNEKLDREELCGSTE
PCVLPFQVLLENPLQFFQAALRVRDINDHAPEFPAREMLLKISEITTPGKLFPLKMAQDL
DAGSNSLQTYIISSNPHFHVLTRHRSDGRKFPELVLDKALDREEQPEHRLTLTALDGGSP
PRSGTTEIKILVLDSNDNAPEFAQELYEAQIPENNSLGSLIITVSARDLDAGSFGEVSYA
LFQVDDINQPFEINTITGEIRLRKTLDFEEIQSYHVDIEATDGGGLSGKCSLVIKVLDVN
DNAPQLTMSSLISPIPENLPEIIVAVFSVSDADSGQNQQVLCSIDDNLPFLLRPSVENFY
TLVTEGALDRESQAQYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVR
ENNSPALHIGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALD
YEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAA
EAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRL
LVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSL
FLVSVLVFVAVRLCRRSRAASGGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSG
TGEFKFLKPIIPNIVGEGANRGTEENSHFRNHFGFS
NT seq 2451 nt   +upstreamnt  +downstreamnt
atggtggacgtgctgatggggactggaaaaggattttttcctctgggatcagacataatg
gagatggcgcgaacaaaagtacatcgcaagaaaaggcaagtggcaattctcattatatgg
atgcttttgtgggaagccggttcagaatcgattcaatattctgtactggaggagtcagaa
aggggcacgtttgtggccaatttgacaaaggacctgggactcgggagaggagaactggct
gcgcggggtgcccaggttgttttcaaggggaacagacagcatttgcagcttgacccacag
acccatgatttactgctaaatgagaaactggaccgggaagagctgtgcggctccactgag
ccatgtgtgctacctttccaagtgttactggaaaatcccttgcagttttttcaggctgct
ttacgagtcagagatataaatgaccacgccccggagttcccagccagagaaatgctactt
aaaatatcagaaattactacaccaggaaagctatttcctttgaaaatggcacaggattta
gacgctggtagcaacagtcttcagacctacataatcagctccaatcctcatttccacgtt
ctcactcgccatcgcagcgacggcaggaagttcccggagctggtgctggacaaagccttg
gaccgcgaggagcagcccgagcataggcttaccctcacagcgctggatggtgggtctccg
ccccggtctggaaccacggagattaagatcctggtcttggacagcaatgacaatgctccc
gagtttgctcaggagctctatgaggcacaaatccctgaaaacaattccctgggctctctg
attatcactgtctcagccagagatttagatgcaggatcctttggggaggtatcttatgcc
ctatttcaggtagatgacattaatcaaccttttgaaataaacacaattacaggagaaatt
cgactgagaaagactttggattttgaggaaattcaatcttatcacgtggatattgaggct
acagatggcgggggactatcaggaaaatgctctttagtcatcaaggttctggacgtaaat
gacaacgctcctcaattgaccatgtcgtcactcatcagtcccatccccgaaaacctgcca
gaaatcatagtagcagttttcagtgtgtcagatgcagattctggacaaaatcaacaagtt
ctttgttctatagatgacaatctgccctttcttctaagaccatcagtagagaatttctac
acgttggtaactgaaggagcgctggatagagagagccaggcccagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccagcacaacttaaccgtgacggtg
tccgacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctgcgggtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcgggc
gccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgcccctg
gcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
ctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgag
gcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcgctc
ttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcg
tcggggggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtggacgtcagc
ggcacggggaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggctcaggg
accggcgagttcaagttcctcaagcccattatccccaatatcgtgggtgaaggggccaat
aggggcacggaggaaaactctcactttagaaatcattttgggttcagttag

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