Ailuropoda melanoleuca (giant panda): 100468550
Help
Entry
100468550 CDS
T01329
Name
(RefSeq) protocadherin beta-6
KO
K16494
protocadherin beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100468550
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
100468550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100468550
NCBI-ProteinID:
XP_002912599
Ensembl:
ENSAMEG00000024824
LinkDB
All DBs
Position
3:28974059..28978229
Genome browser
AA seq
816 aa
AA seq
DB search
MVDVLMGTGKGFFPLGSDIMEMARTKVHRKKRQVAILIIWMLLWEAGSESIQYSVLEESE
RGTFVANLTKDLGLGRGELAARGAQVVFKGNRQHLQLDPQTHDLLLNEKLDREELCGSTE
PCVLPFQVLLENPLQFFQAALRVRDINDHAPEFPAREMLLKISEITTPGKLFPLKMAQDL
DAGSNSLQTYIISSNPHFHVLTRHRSDGRKFPELVLDKALDREEQPEHRLTLTALDGGSP
PRSGTTEIKILVLDSNDNAPEFAQELYEAQIPENNSLGSLIITVSARDLDAGSFGEVSYA
LFQVDDINQPFEINTITGEIRLRKTLDFEEIQSYHVDIEATDGGGLSGKCSLVIKVLDVN
DNAPQLTMSSLISPIPENLPEIIVAVFSVSDADSGQNQQVLCSIDDNLPFLLRPSVENFY
TLVTEGALDRESQAQYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVR
ENNSPALHIGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALD
YEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAA
EAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRL
LVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSL
FLVSVLVFVAVRLCRRSRAASGGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSG
TGEFKFLKPIIPNIVGEGANRGTEENSHFRNHFGFS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgtgctgatggggactggaaaaggattttttcctctgggatcagacataatg
gagatggcgcgaacaaaagtacatcgcaagaaaaggcaagtggcaattctcattatatgg
atgcttttgtgggaagccggttcagaatcgattcaatattctgtactggaggagtcagaa
aggggcacgtttgtggccaatttgacaaaggacctgggactcgggagaggagaactggct
gcgcggggtgcccaggttgttttcaaggggaacagacagcatttgcagcttgacccacag
acccatgatttactgctaaatgagaaactggaccgggaagagctgtgcggctccactgag
ccatgtgtgctacctttccaagtgttactggaaaatcccttgcagttttttcaggctgct
ttacgagtcagagatataaatgaccacgccccggagttcccagccagagaaatgctactt
aaaatatcagaaattactacaccaggaaagctatttcctttgaaaatggcacaggattta
gacgctggtagcaacagtcttcagacctacataatcagctccaatcctcatttccacgtt
ctcactcgccatcgcagcgacggcaggaagttcccggagctggtgctggacaaagccttg
gaccgcgaggagcagcccgagcataggcttaccctcacagcgctggatggtgggtctccg
ccccggtctggaaccacggagattaagatcctggtcttggacagcaatgacaatgctccc
gagtttgctcaggagctctatgaggcacaaatccctgaaaacaattccctgggctctctg
attatcactgtctcagccagagatttagatgcaggatcctttggggaggtatcttatgcc
ctatttcaggtagatgacattaatcaaccttttgaaataaacacaattacaggagaaatt
cgactgagaaagactttggattttgaggaaattcaatcttatcacgtggatattgaggct
acagatggcgggggactatcaggaaaatgctctttagtcatcaaggttctggacgtaaat
gacaacgctcctcaattgaccatgtcgtcactcatcagtcccatccccgaaaacctgcca
gaaatcatagtagcagttttcagtgtgtcagatgcagattctggacaaaatcaacaagtt
ctttgttctatagatgacaatctgccctttcttctaagaccatcagtagagaatttctac
acgttggtaactgaaggagcgctggatagagagagccaggcccagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccagcacaacttaaccgtgacggtg
tccgacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctgcgggtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcgggc
gccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgcccctg
gcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
ctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgag
gcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcgctc
ttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcg
tcggggggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtggacgtcagc
ggcacggggaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggctcaggg
accggcgagttcaagttcctcaagcccattatccccaatatcgtgggtgaaggggccaat
aggggcacggaggaaaactctcactttagaaatcattttgggttcagttag
DBGET
integrated database retrieval system