Ailuropoda melanoleuca (giant panda): 100468658
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Entry
100468658 CDS
T01329
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04120
Ubiquitin mediated proteolysis
aml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100468658 (SYVN1)
04120 Ubiquitin mediated proteolysis
100468658 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100468658 (SYVN1)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100468658 (SYVN1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100468658 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
100468658
NCBI-ProteinID:
XP_002916693
Ensembl:
ENSAMEG00000017667
UniProt:
D2H4Q9
G1MH28
LinkDB
All DBs
Position
16:complement(83899034..83906352)
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AA seq
609 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIISLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPQAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMAPFPPVPPPPSSGEAVAPPSTSAAALPRPSGA
ATTTAAPAASAPGSAPAPEAGPGPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEE
LRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVSPTEETAP
AVVTTASPTSISSSEATTPSPGASPPAPEPEKPPAPESVGTEELPEDGEPDAAELRRRRL
QKLESPIAH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctttacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgcactcttcactctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggattttatggaacgcagccccaatatctcctggctctttcactgccgc
attatctcccttatgttcctcctgggtatcctggacttcctctttgtcagccatgcctat
cacagcatcctgacccgtggggcttcggtgcagctggtgtttggctttgagtacgccatc
ctgatgaccatggtgcttaccatctttatcaagtatgttctgcactccgtggacctccag
agcgagaacccctgggacaacaaggccgtgtacatgctgtacacggagctgtttacaggc
ttcatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacaccttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaggctgtgaca
gacgccatcatgtctcgccgagccatccgcaacatgaacacactgtatccggatgccacc
ccggaggaactccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccacaccagctgcctgcgttcctggttc
cagcggcagcagacctgccctacgtgccgtatggatgtcctccgggcatcactgccgacc
cagtcaccaccgcccccggaacctgcggatcaggggcccccgcaggccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctgtggccccccatggcccccttcccacctgttccacctccccccagctca
ggagaggctgtggcccctccatccaccagtgcagcggcccttcctcggcccagtggagcc
gccaccaccacagcggcccccgctgcctcggcccctggctccgcccccgccccggaggcc
ggccccggcccaggcttccccttccctcctccctggatgggcatgcccctgcctccgccg
ttcgccttccccccgatgcccgtgccccccgcgggctttgccgggctgaccccggaggag
ctgcgggctctggaaggccacgagcggcagcacctggaggcacggctgcagagcctgcgc
aacatccacacgctgctggacgccgccatgctgcagatcaaccagtacctcaccgtgctc
gcctccctggggccccctcggcctgccacctctgtcagccccactgaggagacggcccct
gcagttgtcaccactgcctcccccaccagcatctccagctccgaggccaccaccccatcc
cctggagcctccccaccagcccctgagcctgaaaagcctccagctcctgagtcggtgggc
acagaggagctgcctgaggacggggagcccgacgcagcggagctccgccgccgccgcctg
cagaagttggagtccccgattgcccactga
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