Ailuropoda melanoleuca (giant panda): 100468759
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Entry
100468759 CDS
T01329
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X4
KO
K08532
RAR-related orphan receptor alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04659
Th17 cell differentiation
aml04710
Circadian rhythm
aml05017
Spinocerebellar ataxia
aml05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100468759 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
100468759 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100468759 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100468759 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100468759 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100468759 (RORA)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100468759 (RORA)
Nuclear receptors [BR:
aml03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100468759 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100468759
NCBI-ProteinID:
XP_019659034
Ensembl:
ENSAMEG00000008017
LinkDB
All DBs
Position
5:45892405..46594510
Genome browser
AA seq
470 aa
AA seq
DB search
MTHEWSSVSCPQAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQK
NCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQ
QQPGEAEPLTPTYNISANGLTELHEDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSG
LDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLRE
ELQQITWQTFLQEEIESYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQI
VLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSM
HLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICK
VSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgaatggtcctctgtttcctgtcctcaagctcaaattgaaattattccttgc
aagatctgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgc
aagggctttttcaggagaagtcagcaaagcaatgccacctactcctgtcctcgtcagaag
aactgtttgattgatcgaaccagtagaaaccgctgccaacactgtcgattacagaaatgc
cttgccgtggggatgtctcgagatgctgtaaaatttggccggatgtcaaaaaagcaaaga
gacagcttgtacgcagaagtacaaaaacaccggatgcagcagcagcagcgagaccaccaa
cagcagcctggagaggccgagccgctgactcccacctacaacatctcggccaacgggctc
accgagcttcacgaggacctcagcaactacatcgacgggcacaccccggaggggagcaag
gcagactccgccgtcagcagcttctacctggacatacagccttccccagaccagtcaggt
cttgatatcaatggaatcaaaccagaaccaatatgtgactacacaccagcatcaggcttc
tttccctactgttctttcaccaacggagagacttccccaactgtgtccatggcagaatta
gaacaccttgcacagaatatatctaaatcacatctggaaacttgccaatacttgagagaa
gagctccagcagataacgtggcagacctttctgcaggaggagatagagagctaccaaaac
aagcagcgggaggtgatgtggcagttgtgtgccatcaaaatcacggaagctatacagtac
gtggtggagtttgccaaacgcattgacggatttatggaactgtgtcaaaatgatcaaatt
gtgcttctcaaagcaggttctctagaggtggtgtttatcagaatgtgccgtgccttcgac
tctcagaacaacaccgtgtactttgacgggaaatatgcgagccccgatgtcttcaaatcc
ttgggttgtgaagactttattagctttgtatttgaatttggaaagagtttatgttctatg
cacctgactgaagatgaaattgcattattttctgcatttgtgctaatgtcagcagatcgc
tcgtggctgcaggaaaaggtaaaaattgaaaaactgcaacagaaaattcagctagctctt
caacacgtcctgcagaagaatcaccgagaagatggaatcctaacaaagttaatatgcaag
gtgtctacattaagagccttatgtggacgacatacagaaaagctaatggcatttaaagca
atatacccagacattgtgcgacttcattttcctccattatacaaggagttgttcacttca
gaatttgagccagcaatgcaaattgatgggtaa
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