Ailuropoda melanoleuca (giant panda): 100468799
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Entry
100468799 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-5
KO
K16494
protocadherin beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100468799
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
100468799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100468799
NCBI-ProteinID:
XP_034512029
Ensembl:
ENSAMEG00000025553
LinkDB
All DBs
Position
3:28957556..28963912
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AA seq
795 aa
AA seq
DB search
METALAKTPQKRQVIFLAILLLLWEAGSDAIRYSMPEETESGSFVANLAKDLGLRVGELG
TRGARIHYKGNKEVLQLDIETGNLLLYEKLDREVLCGATDPCVLYFQLLLENPVQFFQAD
LQLTDINDHSPEFLEKEMPLKIPESIQPGTTFPLKIAQDLDVGINTVQNYTISPSSHFHV
VTRNRGDGRIYPELMLDRALDREEQSELSLTLTALDGGTPPRSGTTVVRIEVVDINDNAP
QFLQSLYEVQVPENSPLNSLVVAVSAQDLDSGTYGNVVYTLFQGDEVTQPFVIDENTGEI
RLKKALDFEATRYYNVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSTLASSTPENSP
ETVVAVFSVSDPDSGDNGRMVCSIQNDLPFLLKPTFKNFYTLVTERPLDRETQAEYNITI
TVTDLGTPRLKTQLNXVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAGA
NAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSPAL
SSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLLVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLVSVLVFVAVRLCRRSRAAS
GGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSGTGEFKFLKPIIPKFPPHGAVE
EIEGNATFRNSFGFN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgctagcaaaaacgccacagaaaaggcaagttatctttcttgctatattg
ttgcttttgtgggaggctggctctgatgcgattaggtattccatgccagaagaaacagaa
agtggctcctttgtggccaacctggcgaaagaccttgggctcagggtgggggagctaggg
actcggggcgcgcgaatccattacaaaggaaacaaagaggtcttgcagctggatatagaa
accgggaatttgctgctgtatgaaaaactagaccgggaggtgctgtgcggggcgacagat
ccctgtgtactatatttccagttattactggaaaaccctgtgcagttttttcaggctgat
ctgcagcttacggatataaatgaccattccccagagttcctagagaaggaaatgccccta
aaaatcccagagagcattcagccagggaccacatttcctttgaaaatagctcaggacttg
gacgtaggtatcaacactgtgcagaactacacaatcagccccagctcccattttcacgtt
gtcacccgtaatcgcggagatggcagaatatacccagagctcatgctggacagagcgctg
gatcgggaggagcagtccgagctcagtttaaccctcacggcgctggatggtgggactccg
cccaggtcaggcaccactgtagtccgcattgaagtcgtggacatcaatgataacgcccct
cagtttttacagtccctctatgaggtacaggtccccgagaacagccccctaaactcctta
gttgtcgctgtctctgcccaagatttagattcaggaacatacgggaatgtagtctacact
ctattccaaggcgatgaagttactcaaccatttgtaatagatgaaaatacaggagaaatt
cgtctgaaaaaggcattggatttcgaggcaactcgatactataatgtggaaattgcaggc
acagacggcgggggcctttcaggaaaatgcactgtagctatagaggttgtggatgtgaat
gacaacgcccctgaacttaccatgtcgacgctcgcaagctctaccccagaaaactcacca
gagaccgtagtggctgttttcagtgtttctgatccagactccggggacaacggtaggatg
gtttgctccatccagaacgatctcccctttctcctgaaacccacattcaagaacttttac
accctagttacagagagaccactcgacagagagacccaggccgagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccaactcaacnncgtgacggtgtcc
gacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctgcgggtccgcgag
aacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcgggcgcc
aacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgcccctggcc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctggattac
gaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcgctc
agcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctgctg
gtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgaggcc
cgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcgctcttc
ctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcgtcg
gggggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtggacgtcagcggc
acggggaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggctcagggacc
ggcgagttcaagttcttgaagcctattatccccaaatttccgccccatggcgctgtcgaa
gaaatagagggaaacgccaccttccggaatagctttggattcaattag
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