Ailuropoda melanoleuca (giant panda): 100469050
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Entry
100469050 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-4
KO
K16494
protocadherin beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100469050
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
100469050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100469050
NCBI-ProteinID:
XP_002912601
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All DBs
Position
3:28949162..28952843
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AA seq
796 aa
AA seq
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METLERIQPNRQVMVFILMAFLSPALAEPIRYSVMEETESGSFVAHLTKDLGLGIRDLAS
RSARVVSDDDKQCLQLDRQTGDLLLREKLDREELCGPTEPCVLHFQVFLEKPVQFFEGEL
SIQDVNDHSPVFPTGEMLLKIPENSQPGTLFPLKLAQDLDVGSNGLQKYTISPNSHFHVL
TRNHSDGKKYPDLVQDKALDREERPEFSLTLTALDGGSPPKSGTTTVRILIMDVNDNAPE
FVHTPYKVRVLENSPLGSPVLSVSARDVDDGNFGSVSYGLFQASDEIKQTFSINEVTGEI
RLTKKLDFEQIKSYHVEIEAIDGGGLSGKCTVVIDVVDVNDNAPELTISSLTSSVPENAP
ETVVSIFRIRDRDSGDNGKMICSIPDNLPFLLKPTFKNFYTLVTESPLDRESQAEYNITI
TVTDLGTPRLKTQHNLSVTVSDVXDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDAG
ANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSPA
LSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLLVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLVSVLVFVAVRLCRRSRAA
SGGGCAVPEGPFAGHLVDVSGTGTLSHSYQYDMRLTGVPRTGEFKFLKPVFPNLLIEDIE
REIEKNPNCRNSFVFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctagagagaattcaaccaaacaggcaagtgatggtctttattttgatggcg
ttcttgtctccggctcttgctgagcctattcgttattctgtaatggaagaaacagagagt
ggctcctttgtagcccatctgaccaaggatctgggcctgggaatcagggacctggcctcc
cggtcagcccgggtggtgtctgacgatgacaagcagtgcttgcagctggatcgtcagact
ggagatttgcttttgagggagaaactagacagggaagagctatgtggccctactgaaccg
tgtgtactgcatttccaagtgttcctagaaaagccggttcaattttttgaaggcgaatta
tcaatccaggacgtaaatgaccactccccggtattcccaactggggaaatgctcttgaaa
ataccggaaaacagccagccagggactctgtttcccttgaaattagctcaggatttggat
gtgggcagcaatggtcttcaaaaatacactatcagccccaattctcattttcatgttctg
actcgaaatcatagtgacggcaagaaatacccagatttggtgcaggacaaagcgctggat
cgagaggagcggcctgagttcagcttaaccctcactgcgctggatggtgggtctccacct
aagtctggcaccaccacagtgcggatcctgatcatggacgtcaatgacaatgctccggag
tttgtgcacaccccgtataaggtgcgggtcttggaaaacagcccactaggctccccagta
cttagtgtctccgctagagatgtagatgatggaaacttcgggagtgtttcctatggcttg
ttccaggcatcagatgaaattaaacaaactttctcaataaatgaagtcacaggagaaatc
cgactgacaaagaaactggattttgaacaaattaaatcttaccacgtggaaattgaagct
atagacgggggaggcctttctggaaaatgcaccgtcgtcatagatgtggtggatgtgaac
gacaacgcccctgaacttaccatatcttcactcaccagctccgtaccagaaaatgctcct
gagactgtagtctctatcttcagaattcgagatcgagactctggagacaatggaaagatg
atttgctctataccagataatctgccattccttctgaaaccgactttcaagaatttctac
accctggtaacagaaagccccctcgacagagaaagccaggccgagtacaacatcaccatc
accgtcaccgacctggggacccccaggctgaaaacccagcacaacttaagcgtgacggtg
tccgacgtanncgacaacgcccccgccttcagccaaagctcctacaccctgcgggtccgc
gagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcgggc
gccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgcccctg
gcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctggat
tacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctg
ctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgag
gcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcgctc
ttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcg
tcggggggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtggacgtcagc
ggcacggggaccctgtcccacagctaccagtatgacatgcgtctgacgggagttcctagg
actggtgagttcaaattcttgaagccagtatttcccaatctcttgattgaggacattgag
agagaaattgaaaaaaaccccaactgcaggaatagctttgtattcagttaa
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