KEGG   Ailuropoda melanoleuca (giant panda): 100469093
Entry
100469093         CDS       T01329                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04115  p53 signaling pathway
aml04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100469093 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aml04121]
    100469093 (COP1)
Enzymes [BR:aml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100469093 (COP1)
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100469093 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100469093 (COP1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_like WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP
Other DBs
NCBI-GeneID: 100469093
NCBI-ProteinID: XP_011225186
Ensembl: ENSAMEG00000017098
LinkDB
Position
8:complement(79399660..79636471)
AA seq 491 aa
MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS
GLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRL
TAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNG
SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSS
YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKL
WSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK
AVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSE
NNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAAN
SQGTIKVLELV
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgttggaattactagtccagaagaagaaacaactggaagcagaatcacatgcagcccaa
ctacagatccttatggaattcctcaaggttgcaagaagaaataaaagagagcaattggaa
cagatccagaaggagctgagtgttttggaagaggatattaaaagagtggaagaaatgagc
ggcttgtactctcctgtcagtgaggatagcacagtgcctcagtttgaagctccttctcca
tcacacagtagtattattgattccacagaatacagccagcctcctggtttcagtggcagt
tctcagacaaagaaacagccttggtataacagcacattagcatcaagaagaaaacgactc
actgctcattttgaagacttagagcaatgttacttttctacaaggatgtctcgtatttca
gatgatagtcgaactgcaagccagttggatgaatttcaggaatgcttgtctaagtttact
cgatacaattcagtacgacctttggctacattgtcatatgctagtgatctctataatggt
tccagcatagtctctagtattgaatttgaccgggattgtgactattttgcaattgctggg
gttacaaagaaaattaaggtctatgaatatggcacagtcattcaggatgcggtggatatt
cattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagt
taccataagaatctgttagccagcagtgattatgaaggcaccgtcatcctatgggatgga
tttacaggacagaggtcaaaggtttatcaggagcacgagaaaaggtgttggagtgttgac
tttaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagcta
tggtctaccaacctagacaactcagtggcaagcattgaggcgaaggctaatgtgtgctgt
gttaaattcagcccctcttctagataccatttggctttcggctgtgcagatcactgtgtc
cactactatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgaaaa
gcagtctcttatgcaaagtttgtgagtggtgaggaaattgtctctgcctcaacagatagc
cagctaaagctgtggaatgtagggaaaccatactgtctacgttccttcaagggtcacatc
aatgaaaaaaactttgtaggcctcgcttccaatggcgattatatagcttgtggaagcgag
aacaactccctttacttgtactataaaggactttctaagactttgctaacttttaagttt
gatacggtcaaaagtgttctggataaagaccgaaaagaagatgatacaaatgaatttgtt
agtgctgtgtgctggagggcattgccagatggggagtccaatgtgctgattgctgctaac
agtcagggtacaattaaggtgctggagttggtatga

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