Ailuropoda melanoleuca (giant panda): 100469174
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Entry
100469174 CDS
T01329
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100469174 (DDX39A)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100469174 (DDX39A)
Spliceosome [BR:
aml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100469174 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100469174
NCBI-ProteinID:
XP_002921018
Ensembl:
ENSAMEG00000013379
UniProt:
G1M447
LinkDB
All DBs
Position
4:complement(9835797..9844221)
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AA seq
469 aa
AA seq
DB search
MSRAAVPRRRQEALPLLLWRATGNRSRTAVLAARGGERLTSTMAEQDVENELLDYEEDEE
PQAPPESTPAAPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQA
ILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKY
MPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECD
KMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTL
HGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHR
GMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAG
RFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQSR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagccgcagtccctcgtaggaggcaggaagcgctaccgctcttgctgtggcgc
gcgaccggtaaccggagtcggacggctgtcctcgcagcacgcggaggcgagcggctaacc
agcaccatggcagaacaagatgtggaaaatgagcttctggattatgaggaagatgaagag
ccccaggctcctccagagagcactcctgctgcccccaagaaagatgtcaagggttcctat
gtttccatccacagctctggcttccgggactttctgctgaagccagagctcctgagggcc
atagtggactgtggctttgagcatccatctgaggtccagcacgagtgtattccccaagcc
atcctgggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggcggtcttc
gtgctggccaccctgcagcagattgagccggtcaacggacaggtgacagtcctggtcatg
tgtcatacgcgggagctcgccttccagatcagcaaagaatatgaacgcttctccaagtac
atgcccagtgtcaaggtgtccgtgttctttgggggcctttccatcaagaaggatgaagaa
gtattgaagaagaactgtccccatgtcgtagtggggacaccaggccgaatcctggcacta
gtgcgaaaccggagcctgaacctgaagaacgtgaagcacttcgtgctggacgagtgtgac
aagatgctggagcagctggacatgcggcgggacgtgcaggagatcttccgtctgacgccc
cacgagaagcagtgcatgatgttcagcgccaccctgagcaaggagatcaggccggtctgc
aggaagttcatgcaagaccccatggaggtgtttgtagatgatgagaccaagctcacgctg
cacggactgcagcagtactacgtcaaactcaaggacagcgagaagaaccgcaagctcttc
gatctcttggatgtgttggagtttaaccaggtggtgatcttcgtgaagtcagtgcagcgc
tgcatggccctggcccagctcctcgtggagcagaacttccctgccatcgctatccacagg
ggcatggcccaggaggagcgtctgtcacgctatcagcaattcaaagacttccagcggcgg
atcctggtggccaccaatctgtttggccgagggatggacattgagcgagtcaacatcgtt
ttcaactatgacatgcccgaggactcggacacctacctccaccgagtggcccgtgcaggt
cgctttgggaccaaaggtctggctatcacttttgtatctgatgagaatgatgccaaaatc
ctcaatgacgttcaggacaggtttgaagtgaacgtggcagaacttcctgaagaaattgac
atctccacatatattgagcagagccggtaa
DBGET
integrated database retrieval system
