Ailuropoda melanoleuca (giant panda): 100469456
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Entry
100469456 CDS
T01329
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100469456 (PRPF39)
Spliceosome [BR:
aml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100469456 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100469456
NCBI-ProteinID:
XP_002928814
Ensembl:
ENSAMEG00000002185
UniProt:
D2I0W2
LinkDB
All DBs
Position
20:21275667..21306343
Genome browser
AA seq
667 aa
AA seq
DB search
MQNSHMDEYRNSSNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPNVNATAEENEI
ANAVDLPVTETEANFPPEYEKFWKAVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETVDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSTEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKVHTEDTTPSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaattctagtaatggcagcacaggcaacagt
tcagaggtagtggtggaacaatcagctgatttcagtactgagataatgaatgttaccgaa
atggaacagtcccctgatggatctcctaatgtgaatgcaactgcagaagaaaatgaaata
gcaaatgctgtggaccttccagtgacagaaacggaagcaaacttccctccagaatatgaa
aaattctggaaagctgtagaaaacaatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcgtttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacattaaacagtcagatgaggtgtatcgtcgggggcttcaggcaatacctcttagt
gttgacctatggatacattatataaacttcttaaaagaaacagtggaccctggtgaccct
gagacaaacagtacaataagaggaactttcgagcatgctgttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatattaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcac
cattttcagagatttaaagaacatgtacagaataacttgcctagagatctgctcactggc
gaacagtttattcagctgcgaagggaattagcttctgtaaacggacatagtggtgatgac
ggtcctcctggtgatgacctgccgtcgggcattgaagacattactgacccagcgaagcta
attacagaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacagctaaaaaactggaaagaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctcttcgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcact
gaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaacgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataatgaatcatcgttttatgctatcaaactagcccggcatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatcgaaaga
gacaaagaaaatacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacaaagctatacatggttcattacct
attaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctaaatgcttatgatgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggatcagaagaacccgaggaaaagaaagttcacaca
gaagatacaactccatcgtctacacaaatgattgatggtgatttacaggcaaatcaagct
gcatataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattaccctccccctccaacctga
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