Ailuropoda melanoleuca (giant panda): 100469475
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Entry
100469475 CDS
T01329
Symbol
SIN3B
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100469475 (SIN3B)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100469475 (SIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
At4g15545_C
Motif
Other DBs
NCBI-GeneID:
100469475
NCBI-ProteinID:
XP_034513888
Ensembl:
ENSAMEG00000010148
LinkDB
All DBs
Position
4:12296513..12332099
Genome browser
AA seq
1059 aa
AA seq
DB search
MKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQE
NSHSHSDCAENFKPQMLYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLE
ILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGP
CEMNSVQKSEHEKNLEHSKKRSRPSLLRPVSAPAKKMKLRGTKDLSIAAVGKYGTLQEFS
FFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSFLGVK
ELSFAPPMSDRSGDGISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWV
SFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPE
DQEKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEW
REAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSE
GRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFVPSLFFS
QQLELGASEDSADEGRGSPQGQSAEPGDRKKPAPGPQSSPPEEKGAVGEAPASEQPPQQH
KPLDDVYSLFFANNNWYFFLRLHQTLCSRLLRIYRQAQKQLLEHRAEKDREKLLCDGRRE
RGSDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFT
MDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAER
CMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPVEVQHLARYVEQYVGTEGASNSPT
EGFLLKPVFLQRNLKKFRRWQCEQARALRGEAKSSWKRLVGVESACNVDCRFKLSTHKMM
FIVNSEDYMYRRGTLCRAKQVPPPRPRPGSPGSGPRPLTAALTPRXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXVHGLPVTRYRVQYSRRPASP
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttcaaaagccagagcatcgatacgcctggagtcatccgacgcgtgtcgcag
ctcttccacgaacaccctgacctcattgttggattcaacgctttccttcccctcgggtac
agaatagacattcccaagaacggcaagttaaacatacagtcgcctctgtccagccaggag
aattcacacagccacagcgactgtgcagagaacttcaagccacagatgctgtataaggag
gacaagccgcaggtgcccttggagtcggactctgtggagttcaacaacgccatcagctac
gtgaacaagattaagacgcgttttctagaccacccagagatctataggtcattcctggag
atcctgcacacttaccagaaggagcagctaagcacaaagggccggccattccgcggcatg
tctgaagaggaggtgtttaccgaggtggccaacctcttccggggccaggaggacctgctg
tccgagtttggacagttcctgcctgaagccaagcggtctctgttcacaggaaatgggccc
tgtgaaatgaacagcgtccagaagagtgagcatgagaagaacctggaacacagcaaaaag
cgctctcggccctcgctcctccgtccggtgtccgcaccagccaagaaaatgaaactccga
ggtaccaaagacctgtccatcgctgccgtggggaagtacggcactctgcaggagttttcc
ttctttgacaaggttcgcagggtgctgaagagccaggaggtctacgagaacttcctccgc
tgcatcgcgctcttcaaccaggagctcgtgtccggctccgagctcctccagctcgtcagc
ccatttctggggaaatttccagaactgtttgcacagttcaagtccttcctgggggtgaaa
gagctgtcattcgccccgcccatgagcgaccgatccggggacggaataagccgggaaatc
gactacgcgtcttgcaagcgcattggatccagctaccgagcgctccccaaaacctaccag
cagcccaagtgcagtgggaggacggccatctgcaaagaggtgctgaacgacacctgggtc
tccttcccctcctggtcagaggactccactttcgtcagctccaagaagacgccctacgaa
gagcagctgcaccgctgtgaggacgagcgtttcgagttagatgtcgtcctggagaccaac
ctggccacgatccgcgtgttggaaagtgtgcagaagaagctgtcccggatggcgcctgaa
gaccaggagaagttccggctggacgactgtctggggggcacgtcggaggtgatccagcgc
cgcgccatccaccgcatctacggcgacaaggctccagagatcatcgagagcctcaagaaa
aaccccgtcactgctgtccctgtcgtcctgaaaaggctgaaggccaaggaggaggagtgg
cgggaggcccagcagggcttcaacaagatctggcgggagcagtatgagaaggcctatctc
aagtccctggaccatcaggctgtaaacttcaaacagaacgacaccaaggcccttcgctcc
aagagccttctcaatgagatcgagagtgtctacgatgagcaccaggagcagcactccgag
ggccgtagcgccccctccagcgagccgcatctcatcttcgtgtacgaggacaggcagatc
ctggaggacgcggccgccctcatcagctactacgtgaagcggcagccggccatccagaag
gaggaccagggcaccatccaccagctggtgcaccagtttgtgcccagcctcttcttctcc
cagcagctggagctgggggcgtccgaggactccgccgatgagggccgggggagcccccag
gggcagagcgccgagcccggggaccgcaagaagccggcgcccgggccgcagagcagcccc
ccagaggagaagggggccgtgggcgaggcgccggcctctgagcagccgccccagcagcac
aagcccctggacgatgtgtacagcctgttcttcgccaacaacaactggtacttcttcctg
cgcctgcaccagaccctgtgctcccgcctgctcaggatctaccggcaggcgcagaagcag
ctcctggagcaccgcgccgagaaggacagggagaagctgctgtgcgacggccgccgcgag
aggggcagcgaccccgccatggagctgcggctgaagcagccgagtgaggtggagctggag
gagtactacccggccttcctggacatggtgcggagcctgctggagggcagcatcgacccc
acgcagtacgaggacacgctgcgggagatgttcaccatccacgcctacgtgggcttcacc
atggacaagctggtgcagagcatcgccaggcagctgcaccacctcgtgagcgatgacgtc
tgtctgaaggtggtggagctctacctgaacgagaagaagcggggtgccgcaggggggaac
ctgtcctcccgctgcgtccgcgccgccagggagaccagctaccagtggaaggccgagcgc
tgcatggcggacgagaactgcttcaaggtgatgtttctccagcgcaaagggcaggtgatc
atgaccatcgagcttctagacaccgaggaggcccagacagaggaccccgtggaggtccag
cacctggctcggtacgtggagcagtacgtggggaccgagggggcgtccaactcgcccacc
gagggcttcctcctgaagcccgtgttcctgcagaggaacctcaagaagttccgcaggtgg
cagtgtgagcaggcacgcgccctgcgcggcgaggccaagagctcgtggaagcggctggtc
ggggtggagagcgcctgcaacgtggactgccgcttcaagctcagcacccacaagatgatg
ttcatcgtcaactcggaggactacatgtaccgccgcgggaccctctgccgggccaagcag
gtgccccccccccgcccacggcccgggagcccggggtccggcccgcggccattgacggcc
gccctgaccccacgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtg
cacgggctgccggtgacccgctaccgcgtgcagtacagccgccggcccgcctcgccctga
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