Ailuropoda melanoleuca (giant panda): 100469604
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Entry
100469604 CDS
T01329
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04390
Hippo signaling pathway
aml04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100469604 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100469604 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100469604 (SOX2)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100469604 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100469604
NCBI-ProteinID:
XP_034518206
Ensembl:
ENSAMEG00000011029
LinkDB
All DBs
Position
1:complement(81974273..81976927)
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AA seq
321 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcaactccaccgcggcggcggcgggaggcaaccagaagaac
agcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcaacgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggc
gccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgcttatgaagaaggataagtacacgctgcccggcgggctgctggccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggtagctacagcatgatgcaggac
cagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagccc
atgcaccgctacgacgtgagcgcactgcagtacaactccatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatggcg
cttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtggttacc
tcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatg
tacctccccggcgccgaggtgccggagcccgctgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga
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integrated database retrieval system