KEGG   Ailuropoda melanoleuca (giant panda): 100469604
Entry
100469604         CDS       T01329                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04390  Hippo signaling pathway
aml04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    100469604 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100469604 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100469604 (SOX2)
Transcription factors [BR:aml03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100469604 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 100469604
NCBI-ProteinID: XP_034518206
Ensembl: ENSAMEG00000011029
LinkDB
Position
1:complement(81974273..81976927)
AA seq 321 aa
MYNMMETELKPPGPQQTSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcaactccaccgcggcggcggcgggaggcaaccagaagaac
agcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcaacgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggc
gccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgcttatgaagaaggataagtacacgctgcccggcgggctgctggccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggtagctacagcatgatgcaggac
cagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagccc
atgcaccgctacgacgtgagcgcactgcagtacaactccatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatggcg
cttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtggttacc
tcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatg
tacctccccggcgccgaggtgccggagcccgctgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga

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