KEGG   Ailuropoda melanoleuca (giant panda): 100469866
Entry
100469866         CDS       T01329                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X3
  KO
K10803  DNA-repair protein XRCC1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100469866 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aml03400]
    100469866 (XRCC1)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100469866 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 100469866
NCBI-ProteinID: XP_002923977
Ensembl: ENSAMEG00000004315
UniProt: D2HNF1
LinkDB
Position
12:complement(35346209..35378760)
AA seq 630 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFIRFHSPPDKEEAEASPQKVTKLGQFRVKEEDEGA
SSLRPGALFFSRINKTPPAAASDPAGPSYAAATLQASSAASSASPVSRTVGGSSKPQESP
KGKRKLDLNQEERKMPSKPSAQSSPPAVKRPKLPAPTRTPATTPVSAPARGTVPGKTREG
TEPRGPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICA
FANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEDEGTSHSGGSGD
EAPKLPQKRPQTKTKPPQAAGPSSPQRPKTPEETKPASPGPQEDTDTDGEHSEEQGNGAE
DSGDTEDELRRVAEQREQKQPPDQGENGEDPYAGSTDENTDNEGPPESPDLPVPELPDFF
QGKHFFLYGEFPGDERRKLSRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPS
LVFVRPRWIYSCNEKQKLLPHQLYGVVPHA
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgccggagatccggcttcgccatgtggtgtcctgcagtagccaggactcgacccactgt
gcagaaaaccttctcaaggcggacacttaccgaaaatggcgagcagccaaggcaggcgag
aagactatctctgtggtgctccagttggagaaggaggaacagatacacagcgtggacatc
ggcaatgacggctcggcctttgtggaggtgctggtgggcagctcggccggaggggctggg
gagcaagactacgaggtcctgctggtcacttcatcttttatgtccccttccgagagccgc
agtggctcaaaccccaatcgtgttcgcatttttgggcctgacaagttggtccgggcagca
gcagagaagcgctgggaccgcgtcaaaattgtttgcagccagccctacagcaaggactcc
ccgtatggcctgagttttatacggtttcacagccccccagacaaagaggaggcagaggcc
tcaccccagaaggtgacgaagcttggccagttccgcgtgaaggaggaggatgagggtgcc
agctccttgagacctggggccctcttcttcagcaggatcaataagacccccccagccgca
gccagtgacccggcaggacccagctatgcagctgctaccctgcaggcctctagtgccgcc
tcttcagcctctccggtctccaggacagtaggcggcagctccaagcctcaagagtccccc
aaaggcaagagaaagttggatttgaaccaagaagaaaggaagatgcccagcaaaccatca
gcccagtcctcaccaccagccgtcaagagacccaaattgccagctcccacccgcacccca
gccaccaccccagtctctgccccagcacgaggcacagtgccaggaaagacccgagaaggc
accgaacccaggggaccccgagctggcccgcaggagctggggaagatccttcagggtgtg
gtggtggtgctgagtggcttccagaaccccttccgctcagagctccgagacaaggccctg
gagctgggggccaaatatcggccagactggactccagacagcacccacctcatctgtgcc
tttgccaacacccccaagtacagccaggtcctaggtctcggaggccgcatcgtgcggaaa
gagtgggtgctggactgtcaccgaatgcggcgtcggctgccctcacggaggtacctcatg
gcagggccaggctccagcagtgaggatgaagggacctctcatagtggcggcagcggggat
gaagcccccaagcttccccaaaagcgcccccagaccaaaaccaagccccctcaggcagca
ggacccagctcacctcagagacccaaaacgccagaagagaccaaaccagcctcaccaggg
ccccaggaagataccgacactgacggggagcattcagaagaacagggcaatggggcagaa
gactctggggataccgaggatgagctgagaagggtggccgagcagagggagcaaaagcag
ccccctgaccagggggagaatggcgaggacccgtatgcaggatccacagatgagaacaca
gacaacgagggtcccccagagtctcccgacctgccagttcctgagctcccagacttcttc
cagggcaaacacttcttcctgtacggagagttccccggagatgagcggcggaagctcagc
cgatatgtcacagccttcaatggggagcttgaggactacatgagcgaccgggtccagttt
gtgatcacagcacaggagtgggaccccagttttgaggaggccctgatggacaacccctcc
ttggtgttcgtccgcccccgatggatctacagttgcaacgagaagcagaagttacttccc
caccagctttatggggtggtgccccacgcctaa

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