Ailuropoda melanoleuca (giant panda): 100470023
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Entry
100470023 CDS
T01329
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aml03016
]
100470023 (PUS1)
Enzymes [BR:
aml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100470023 (PUS1)
Transfer RNA biogenesis [BR:
aml03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100470023 (PUS1)
Prokaryotic type
100470023 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100470023
NCBI-ProteinID:
XP_034495210
Ensembl:
ENSAMEG00000013715
LinkDB
All DBs
Position
12:complement(881405..891650)
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AA seq
454 aa
AA seq
DB search
MAARGLRAAAGALRRACGAWSPRLGRRLFCSPPMAGNVQAPAPVGAAREQDRKARIWEDA
EQQAKKLKSSPDAEPHRKLPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQ
SGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILEKINSHLPPHIRILG
LKRVTGGFNSKNKCDARTYFYMLPTFAFAHKDHDVQDERYRLSAETLRRVNGLLACYRGT
HNFHNFTSQKGPHEASARRYILDMFCEEPFVREGMEFAVIKVKGQSFMTHQIRKMVGLVV
AVVKGYAPESVLERSWGEAKVDVPKAPGLGLVLERVHFEKYNQRFGNDGLHEPLDWTQEE
AGVTAFKEQHIYPTIISTELHERSMAQWLSTLPVHDFNATAHAAASPGAKVGSGAVRLEA
GAPGLPQALPSGSLAKLLTCSALLSLRPLCRRAS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgcggcctgcgggcggcggccggggccctgcggagagcctgcggagcgtgg
agcccgcgcctgggacggcgtctgttctgctcgccccccatggccgggaacgtgcaggcc
cccgcccccgtgggcgccgcgcgggagcaggaccggaaggcccggatctgggaggacgcc
gagcagcaggccaagaagctcaagagcagcccggacgccgagccgcaccggaagctgccc
aagcggaagatcgtgttgctcatggcctattccgggaagggctaccacggcatgcagagg
aatgttgggtcttcacaattcaagaccatcgaagatgacttggtgtctgccctggtccag
tcgggttgtattcctgaaaatcacggcgaagacatgaggaaaatgtccttccagcggtgc
gcccggacagacaagggtgtgtccgcggctgggcaggtcgtgtccctgaaggtgtggctg
attgacgacattttagaaaagatcaacagccaccttccgcctcacattcggatactggga
ctgaagagggtcacgggcggcttcaactccaagaacaagtgcgacgccaggacctatttc
tacatgctgcccacgttcgccttcgcccacaaggaccacgacgtgcaggacgagcgctac
cggctgagcgcagagacgctgcggcgtgtgaacgggctgctcgcctgctacaggggcacg
cacaacttccataacttcacctcgcagaaggggccgcacgaggccagcgctcggcgctac
atcctggacatgttctgtgaggagccgtttgtgcgggagggcatggagttcgcagtgatc
aaggtgaaggggcagagcttcatgacccaccagatcaggaagatggtcggcctggtggtg
gccgtcgtcaagggctacgcccccgagagcgtgctggagcgcagctggggggaggcgaag
gtggacgtgcccaaggcgccggggcttggcctggtcctggagcgcgtgcacttcgagaag
tacaaccagcgctttggcaacgacgggctgcacgagccgctggactggacgcaggaggag
gcaggggtcacggcgttcaaggagcagcacatctaccccaccatcatcagcaccgagctc
cacgagcggtccatggcccagtggctgagcaccctgcccgtgcatgacttcaatgccact
gcgcacgcggcagccagcccaggcgccaaggtggggtctggggccgtgaggctggaggcc
ggggccccggggctgccacaggccctcccttctgggagcttggccaagcttctcacctgc
tctgcactgctgtccttgcgtccgttgtgcagacgagcaagctga
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