Ailuropoda melanoleuca (giant panda): 100470056
Help
Entry
100470056 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 6
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100470056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP_C
GBP
RHD3_GTPase
MMR_HSR1
ApoO
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-GeneID:
100470056
NCBI-ProteinID:
XP_034509723
LinkDB
All DBs
Position
2:complement(59470467..59500211)
Genome browser
AA seq
702 aa
AA seq
DB search
MASGSTMTAPICLVENHGEQLNVNPEALQILDKISQPVVVVGIVGLYRTGKSYLMNCLAG
QNHGFVLGSTVRSETKGIWMWCVPHPSKLNHTLVLLDTEGLGNIERIDLKNDSQIFALTV
LLSSTLVYNSMGTINHQALEQLHYVTELSQLIRAKSSSKFSGVDDSTEFVSFFPDFIWAL
RDFTLEMKINGFFITEDEYLEDALKLLPGTNPKIQDSNLPRECIRKFFPKXKCFIFDRPT
SDRNLLFHLEKVPEDKLDSTFQEQSKKFCTYIFNHTKTKTLKEGIIVTGSRLRTLVVTYV
DIINTGAVPCLENVVTTLAQRENSVAVQKAADHYSKQMAQRVTLPTDTLQELLDVHADCE
REAIAVFMEHSFKDDKREFQKKLMDTVKERKKDFLLQNEDASFKYSQAQLKQLSEPLMKS
ISRGIFCVPGGYHLYLEAKEKVESDYNLVPRKGVKADEVLQQFLQNQAAVENSILQGDDL
LTDQEKALAAKRALKKAAEKELELLSQKYKEQQQKLEAQERSFKENIAQLRDKLEREREN
FRVEQEKMLKHKLKIQEELLNEGFLKKSVKLHAEIQLLKKEIAANKEDKCSLGPWIFDVI
GKMLDEEISDPNVCGTAEQAKEKAAEKEVELLSQKYKEQQQKLEDQERSFKENIAQLTNK
LETDRENLRREQEKMLKHKLKRHVLEEVAAAEVEQMTACVLL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggatccaccatgacagcacccatttgtctagtggaaaaccacggagagcaa
ctgaatgtgaatccagaagcattacagattcttgacaagatttctcaacctgtggtggtg
gtaggcattgtagggctgtatcggacaggaaaatcctacctgatgaactgcctggcagga
cagaaccatggcttcgtcctgggttccacagtgaggtctgaaaccaagggcatttggatg
tggtgtgtaccccacccctccaagctgaaccacaccctggtcctcctggacactgaaggt
ctaggtaatatagaaaggattgaccttaagaatgactcacagatctttgccctgactgtg
cttctgagcagcaccttggtctacaacagcatgggcaccatcaaccaccaggccctggag
cagctgcactatgtgactgaactatcacagctaatcagggcgaagtcgtcctcaaagttc
agtggggtagacgactctacagagtttgtgagtttctttccagactttatttgggctcta
cgagatttcacactggaaatgaagataaatggattcttcataactgaagatgagtaccta
gaggatgccttgaagctgcttccaggaacaaatcccaaaatccaggactccaacttgccc
agggagtgtatcaggaagttctttccaaagnngaagtgcttcatctttgaccggcctaca
agtgacagaaatctcttattccatcttgagaaggtgccagaagacaagctagacagtact
ttccaggagcaatcaaagaaattctgtacctatattttcaatcatacaaagaccaagacc
ctaaaagagggaatcattgtcactgggagccggctgagaactctggtggtaacctatgtg
gatattatcaatactggagcagtgccttgcttagagaatgtggtgacaactctggctcag
cgtgagaactcagtggcagtgcagaaggcagctgaccactacagcaagcagatggcccag
cgagtgacactccccacagacacgctccaggagctgctggatgtgcatgcagactgtgag
agggaagccattgcagtgttcatggagcactccttcaaggatgacaagcgggagttccag
aaaaaactcatggacaccgtaaaggaaagaaagaaagatttcttgctgcagaatgaagat
gcttctttcaaatattcccaggcacagcttaagcaactttcagagcccctgatgaaaagc
atttcaagaggaattttctgtgttcctggaggataccatctttacttagaggcaaaggaa
aaggttgaatcagactataacctagtgcccaggaaaggggttaaggcagatgaagttctc
cagcaattcttacagaaccaggcggcagtagagaactccatcctgcagggagacgatctc
ctcactgatcaggagaaggcgctagcagctaagcgggctttgaagaaggcagctgagaag
gaattagagctgctaagccagaaatacaaggagcaacagcaaaaactggaggctcaagag
agaagctttaaggaaaacatagcccagctgagagataagttggagagagaaagagaaaac
tttcgggtggaacaggaaaaaatgttgaagcacaagctgaagatccaagaagaacttctt
aatgaaggatttctaaagaaatctgtgaagttgcatgcagagatacagctactaaaaaaa
gagattgctgcaaataaggaagataaatgttcgttgggtccatggatctttgatgtgatt
ggtaaaatgttagatgaagaaatatcagatcctaacgtctgtggaacagctgaacaggct
aaggagaaggcagctgagaaggaagtggagctgctaagccagaaatataaggagcaacag
caaaaactggaggatcaagagagaagcttcaaggaaaacatagcccaactgacaaataag
ttggagacagatagagaaaaccttcggagggagcaggaaaaaatgttgaagcacaagctg
aagagacatgtcttggaagaagttgctgcggctgaggtcgaacagatgactgcctgtgtt
cttctttag
DBGET
integrated database retrieval system
