Ailuropoda melanoleuca (giant panda): 100470124
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Entry
100470124 CDS
T01329
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
aml05202
Transcriptional misregulation in cancer
aml05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100470124 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100470124 (DDX5)
05205 Proteoglycans in cancer
100470124 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100470124 (DDX5)
03009 Ribosome biogenesis [BR:
aml03009
]
100470124 (DDX5)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100470124 (DDX5)
Spliceosome [BR:
aml03041
]
Complex A
U1 snRNP components
U1 related factors
100470124 (DDX5)
Complex B
100470124 (DDX5)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
Pre-60S particles
Helicases
100470124 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
100470124
NCBI-ProteinID:
XP_034496775
Ensembl:
ENSAMEG00000002685
LinkDB
All DBs
Position
13:complement(31408185..31414824)
Genome browser
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagatcgcggccgggatcgagggtttggtgcgcctcga
tttgggggaagtagggcagggcctctatctggaaagaagttcggaaaccctggggagaaa
ctagtcaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggcgcacagcacaagaggtggagacatacagaaggagtaag
gaaattacggttagaggtcacaactgtccaaagccagttctgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtgattgcaagacagaattttactgaacccactgctatt
caagctcagggatggcccgttgctttaagtggattggatatggttggagtagcacagact
ggatccgggaaaacattgtcttatttgctgcctgctatcgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccaactcgggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcatgtcgattgaagtccacttgc
atctatggtggtgctcccaagggaccacagattcgtgatttggagagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgaga
agaactacctaccttgtccttgatgaagcagatagaatgcttgatatgggtttcgaaccc
caaataaggaagattgtggatcagataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgcagaagatttcctgaaagactacattcatata
aacattggtgcactagaactgagtgcaaaccacaacattctccagattgtggatgtatgt
catgatgtagaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgtggaaaccaagagaagatgtgatgagcttactagaaaa
atgaggagagacgggtggcctgccatgggtatccatggtgacaagagtcaacaggagcgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatattctgcgggc
aaaaggggtggatttaatacctttagagacagggaaaattatgacagaggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaatggttatgatagcactcagcaatacggaagtaac
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccaatgccaacaggatattctcaataa
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integrated database retrieval system
