Ailuropoda melanoleuca (giant panda): 100470305
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Entry
100470305 CDS
T01329
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04137
Mitophagy - animal
aml04141
Protein processing in endoplasmic reticulum
aml05014
Amyotrophic lateral sclerosis
aml05022
Pathways of neurodegeneration - multiple diseases
aml05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100470305 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100470305 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100470305 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100470305 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
100470305 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100470305 (VCP)
03009 Ribosome biogenesis [BR:
aml03009
]
100470305 (VCP)
04131 Membrane trafficking [BR:
aml04131
]
100470305 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100470305 (VCP)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100470305 (VCP)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100470305 (VCP)
Membrane trafficking [BR:
aml04131
]
SNARE
SNARE associated proteins
Others
100470305 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100470305 (VCP)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100470305 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
100470305
NCBI-ProteinID:
XP_002929233
Ensembl:
ENSAMEG00000015455
UniProt:
G1MAF6
LinkDB
All DBs
Position
7:complement(24794257..24808366)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagccgattcaaaaggtgatgacttatcaacagccattcttaaacagaag
aaccgtcctaatcggttaattgtcgatgaagccatcaatgaggacaacagtgtggtgtct
ttgtctcagcccaagatggatgagctacagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttccgatgag
aagattcgaatgaatagagttgttcggaacaaccttcgtgtacacctaggggatgtcatc
agcatccagccgtgccctgatgtgaagtacggcaaacgtattcatgtgctacccatcgat
gacacggtggaaggcatcactggcaatctcttcgaggtataccttaagccatacttcctg
gaagcttatcgacccatccggaaaggagacattttccttgtccggggtggaatgcgtgct
gtagagttcaaagtagtagagacagatcccagcccttactgcattgttgctccagacaca
gtgatccactgtgaaggggagcctatcaaacgagaggatgaggaagaatccttgaatgaa
gtaggctacgatgacattggtggctgcaggaaacagctggctcagataaaggagatggta
gagctacccctcagacatcctgccctctttaaggcaattggtgttaagcctcctcgggga
atcctgctctatggacctcctgggactgggaagaccctaattgcccgagctgtggcaaat
gagactggagctttcttcttcttgatcaatggtcctgagatcatgagcaagttggctggt
gagtctgagagtaatcttcgtaaagcctttgaggaggctgagaagaatgctcctgctatc
atcttcattgatgagcttgatgccatcgctcccaaaagagagaaaacccacggggaggtg
gaacggcgtattgtatcacagttgttgaccctcatggatggcctaaagcagagagcacat
gtgattgtcatggcagcaacaaacagacccaatagcattgacccagcccttcggcgattt
ggtcgctttgacagggaggtagatattggaatccctgacgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaagctggcagacgatgtggacctggaacaggtcgcc
aatgagactcatgggcatgtgggcgccgacttagcagccctgtgctcggaggctgctctt
caagctatccgcaagaagatggacctcattgacttagaggatgagactatcgatgctgaa
gtcatgaactctctcgcagttactatggatgatttccggtgggccctgagccagagcaat
ccatcagcactgcgggaaactgtggtggaggtaccacaggtgacctgggaggatatcggg
ggcctggaggatgtcaaacgtgagcttcaggagctcgtccagtaccctgtggagcaccca
gacaaattcctcaagtttggcatgacaccctccaaaggagtactcttctatggacctcct
ggctgtggaaaaaccttgctggccaaagccatcgctaatgagtgccaggccaacttcatc
tctatcaagggtcctgagctgctcaccatgtggtttggagagtctgaagccaatgtcagg
gaaatctttgacaaggcccgccaagctgccccctgtgtactgttctttgatgagctggat
tcaattgccaaggcccgtggtggtaacattggagatggtggtggggctgcagacagagtc
atcaaccagatcctgacagaaatggatggcatgtctacaaaaaagaatgtgtttattatc
ggcgctaccaatcggcctgacatcattgatcctgctatcctgcgacctggccgccttgat
caactcatctatatcccgcttcctgatgagaagtcccgtgttgccatcctcaaggccaac
ctgcgcaagtccccagttgccaaggatgtggatttggagttcctggctaagatgactaac
ggcttctctggagctgacctgacagagatttgccaacgcgcttgcaagctggccatccgt
gaatccatcgagagtgaaattaggcgagaacgggagaggcagaccaacccatctgccatg
gaggtagaagaagatgatccagtgcctgagatccgccgagatcactttgaggaagccatg
cgctttgcccgccgttctgtcagtgacaatgacatccggaagtatgagatgtttgctcag
acccttcagcagagtcggggctttggcagcttcagattcccttcaggaaatcagggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagtgtgtacacggaagacaat
gatgatgacttgtatggctaa
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