Ailuropoda melanoleuca (giant panda): 100470341
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Entry
100470341 CDS
T01329
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03420
Nucleotide excision repair
aml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100470341 (ERCC4)
03460 Fanconi anemia pathway
100470341 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aml03032
]
100470341 (ERCC4)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100470341 (ERCC4)
DNA replication proteins [BR:
aml03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100470341 (ERCC4)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100470341 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
100470341
NCBI-ProteinID:
XP_002918113
Ensembl:
ENSAMEG00000011323
UniProt:
G1LXW9
LinkDB
All DBs
Position
10:complement(27469636..27501022)
Genome browser
AA seq
913 aa
AA seq
DB search
MEPGQPTAMAPLLEYERQLVLELLDADGLVVCARGLGADRLLYHFLRLHCHPACLVLVLN
TQPAEEEYFINQLKVEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRI
PSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMR
NLFVGKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKELKCH
NPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDC
ITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDAKMNKKGKMSEKMEI
KEEQETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQLREY
ITVGAEAFLLRLYRKTFEKDTKAEEVWMKFRHEDGPKRMAKSNKRPKDPQNKQRAATKER
TLKKKKRRLTLTQMMGKSEEPEEEGDVKEGYPRDTDSSPESSLEEIKHEEFDLNLSSDAA
YGILKDPLTILHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPGKPL
RVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEGREGRDEANLDLVRGSAAA
GVPTDTRKAGGQEQNRPHQTIVVDVREFRSELPSLIHRRGIDIEPVTLEVGDYILTPEMC
VERKSISDLIGSLNNGRLYGQCISMSRYYKRPVLLIEFDPGKPFSLTSRGALHQEISSND
VSSKLTLLTLHFPRLRILWCPSPHATAELFEELKQNKPQPDAATAMAVTADSDTLPESEK
YNPGPQDFLLRMPGVNAKNCRTLMHHVKNIAELASLSQDKLAGILGNPGNAKQLYDFIHT
SYAEVMSKGKMRK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggacagccgacagctatggcgccactgctggagtatgagcggcagctggtg
ctggaactactggacgcggacggactggtagtgtgcgcccgcgggctcggcgcggaccgg
ctcctctaccacttcctccggctgcactgccacccagcgtgcctggtgctggtgctcaac
actcagcccgccgaggaggagtactttatcaatcagctgaaggttgaaggcgtcgaacac
cttccccgccgggtgacaaatgaaatcacaagtaacagtcgctatgaggtctacacacaa
ggaggtgtgatatttgcaacgagtcgaattcttgtggtcgacttcttgactgatagaata
ccttcggatttaattaccggcatcttggtgtacagagctcacaggataatcgagtcttgt
caagaagccttcatcttgcgtctgtttcgccagaaaaacaagcgtggctttattaaagct
ttcacagacaacgctgtcgcctttgatactggtttttgtcacgtggaaagagtgatgagg
aatcttttcgtagggaagctctatctgtggccaaggttccatgtagcggtaaactcgttt
ttagaacagcacaaacctgaggttgtagaaattcatgtttctatgacgcctgccatgctc
gctatccagactgccatactggacattttaaatgcatgtctgaaggaactcaaatgccat
aacccgtccctcgaagtggaagatttgtctttagaaaatgctattggaaaaccctttgac
aagacaatccgccattatctggatcctttgtggcaccaacttggagccaagactaagtcc
ttggttcaggacttgaagatattacgaactttgctgcaatatctctctcagtatgattgt
atcacattccttaatcttctggaatctctgagagcaacagagaaggcttttggtcagaat
tcaggttggctgtttcttgattccagcacctcaatgtttgtaaatgctcgagcaagggtt
taccatcttccagatgccaaaatgaacaaaaagggcaaaatgtctgaaaaaatggagatt
aaagaagaacaagaaacaaaaaaggaattggtcctagaaagcaacccaaagtgggaagca
ttaaccgaagtactgaaagaaatcgaggcagaaaataaggagagcgaagcccttggtggt
ccaggtcaagtacttatttgtgcaagtgatgaccgaacatgttcccagctgagagagtac
atcactgtcggagcagaggccttcttgctgaggctctacaggaaaacctttgagaaggat
accaaagctgaagaagtatggatgaaatttagacatgaggacggtccaaagagaatggcg
aaatctaacaaaaggcctaaagacccccaaaacaaacaaagggctgccaccaaagaaagg
actctcaagaagaaaaagcgaaggttaaccttaactcagatgatggggaagtcggaagaa
ccggaagaggaaggggatgtcaaggaaggctatcctagagacacagacagtagcccagaa
agttccttagaagaaattaagcacgaggaatttgacttaaacttgtcctctgatgctgca
tatggaatcctgaaagacccactcaccatcctccatccgctcctgggctgtagtgacccc
tacgctctgacaagggtgctccacgaagtggagccaagatacgtggttctgtacgatgca
gaactgacgtttgttcgccagcttgagatttatagggcgagcaggcccgggaagcctctg
agggtctactttcttatatatggaggttcaaccgaggaacagcgctatctcactgctttg
cggaaagaaaaggaagcttttgagaaactcataagggagaaggctagcatggtggtccct
gaaggaagggaaggtagggatgaagcaaatctggacctggtaagaggctcggcggctgca
ggcgttcccaccgacactcgtaaagcaggtggccaggaacagaacaggccacatcaaacc
atagtggtggatgtgcgtgagtttcgcagtgaactcccatccctgatccaccgtcggggc
atcgacatcgaaccagtgaccctggaagtcggagactacattctgactccggaaatgtgc
gtggagcgcaagagcatcagcgacctgattggctcattaaacaacggccgcctgtacggc
cagtgcatctctatgtcccgttactacaagcgcccggtgctgctgatcgagtttgacccc
gggaagcccttctccctcacttcccggggcgccctccatcaggagatctccagcaacgac
gtcagttccaagctcaccctcctcacgctccacttccccagactccggattctgtggtgc
ccctcgccgcacgccaccgccgagctgttcgaggagctgaagcagaacaagccgcagccc
gacgcggccacggccatggccgtcaccgccgattcggacacgctccccgagtcggagaag
tacaatcccggtccccaggacttcttgttaagaatgccaggggtgaatgccaagaactgt
cgcaccttgatgcaccacgtgaagaacatcgcggaactagccagcctgtcgcaggacaag
ctggcaggaattctgggcaacccggggaatgccaagcagctctatgacttcattcacacc
tcttacgcagaggtcatgtctaagggaaaaatgagaaaatga
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