Ailuropoda melanoleuca (giant panda): 100470470
Help
Entry
100470470 CDS
T01329
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100470470 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100470470 (RNF43)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100470470 (RNF43)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100470470 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
FANCL_C
Motif
Other DBs
NCBI-GeneID:
100470470
NCBI-ProteinID:
XP_002929443
Ensembl:
ENSAMEG00000011678
UniProt:
A0A7N5JWM1
LinkDB
All DBs
Position
13:14060814..14122989
Genome browser
AA seq
780 aa
AA seq
DB search
MSGGHQLQPAALWPWLLMATLQAGFGRTGLVPAAAVESERSAEQKAIIKVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGKDAEKLMEFVYKNR
KAHVRIELKEPPTWPDYDVWILLTVVGTIFVVILASVLRVRCRPRHSRPDPLQQRTAWAI
SQLATRRYRASCRRARAEWPDSSSSCGSAPVCAICLEEFSEGQELRVISCLHEFHRVCVD
PWLHQHRTCPLCMFNIVEGDSFSQSLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRSAVARPPRPDPFLTSQEPGTAPRHHRLPRAAHPRPQGEQQRLAGAQHPYVQGWGLSH
LRCTSQHPSACPAPPRRARPHDSSGSGESYRTERSGYMADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGEPRGEETQPSVTSRPRSLDSVVPTG
ETQVSSHVHYHRHRHHYKKRFQWHGRKPGPETGAPQARLAIPQTQPQPEPPSPDQQGARS
NPTAPSGQLPNPQWSRALMEAAPGPADAASPSPSSLFHLQKSSLPVRHPQRKRRGGLSEP
TPASRPQDVTAHPACQIFPHYSTSLAYPWSPEAHPLIFGPPGLDRRLLPESPGSCYSGSQ
PVWLCLTPRQSLGPHPPGEGPSEWSSGTPEGRPCPYPHCQVPPAQPGSEEEMEALCDQAV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagccggctgccctctggccctggctgctgatggccacc
ctgcaggcaggcttcggacgcacaggactggtcccggcagcagcggtggagtcggaaaga
tccgcggagcagaaagctattatcaaagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtttttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtacctgtgcaatgccagtgacgacgacaatctggag
cccggattcatcagcatcgtcaagctggagagtccccagcgggccccccgcccctgcctg
tccctggccagcaaggcccggatggcaggggagcgaggcgctagtgccgtcctttttgac
atcacggaggatcgagcagctgctgagcagctgcagcagcccctggggctgacttggccg
gtggtgttgatctggggtaaggacgctgagaagctgatggagtttgtgtacaagaaccga
aaggcccacgttaggattgagctgaaggagcccccaacctggccagattatgacgtgtgg
atcctcctgacagtggtgggcaccatcttcgtggtcatcctggcttcagtgctgcgcgtc
cggtgccgcccccgccacagcaggccggatccccttcaacagcgaacagcctgggccatc
agccagctggccaccaggaggtaccgggccagctgcaggagggcgcgggctgagtggccg
gactccagtagcagctgtggctctgcgcccgtgtgtgccatctgcctggaggagttctct
gagggccaggagctacgggtcatttcctgcctccatgagttccatcgtgtgtgtgtggac
ccctggctgcatcagcatcggacttgccctctctgcatgttcaacatcgtagagggagat
tcgttttctcagtccctgggaccctctcggtcttaccaggaaccaggccggagactccac
ctcattcgccagcatcctggccatgcccactaccacctacctgctgcctacctgttgggc
ccttcccggagcgcagtggctcggcccccacgacctgaccccttcctaacatcccaggag
ccaggcacggccccccggcaccaccgcctccccagagctgcacatcccaggccgcagggc
gagcagcagcgcttggcaggggcccagcacccctatgtgcagggctggggactgagccac
ctccggtgcacctcgcagcacccttctgcttgcccagcacccccacgccgggccaggcct
cacgacagcagcggttctggagaaagctaccgcacagaacgcagcggctacatggccgat
gggcccgccagtgactccagttcggggccctgtcatggctcctcgagtgactcggtggtc
aactgcacggacatcagtctgcagggcatccacggcagcagctctaccttccgcagctcc
ctgagcagtgactttgaccccttggtatactgcagcccggaaggggagccccggggggag
gagactcagcctagtgtgacctctcggccccgttctttggactcagtggtgcccacaggg
gaaacccaggtttccagccacgtccactaccaccgccaccggcaccactacaaaaaacgc
ttccagtggcatggccggaagcctggcccagaaactggggccccccaggccaggcttgcc
attcctcagacacagccccagccagagccgccttcccctgatcagcaaggtgccagatcc
aacccaacggcgccttcagggcagctccccaacccacaatggtccagggccctcatggag
gcagccccaggcccagctgatgctgccagccccagtcccagcagcctcttccatttgcag
aaatccagcctccctgttcgacacccacagaggaaaaggcgggggggcctctcagagccc
accccagcttctcggccccaggacgtgactgcacacccagcttgccagatttttccccat
tacagtaccagcttggcatacccttggtccccggaggcccacccgttgatctttggacct
ccaggcctggacaggaggctgctaccagaaagcccaggctcttgttactcaggttcacag
ccggtgtggttgtgtctgactccacgccagtccctaggaccacacccacctggagagggg
ccttccgaatggagttctggcaccccagagggcaggccgtgcccttacccacactgccag
gtgccgccagcccagcctggctcagaggaggagatggaggcgctgtgtgatcaggccgtg
tga
DBGET
integrated database retrieval system
