Ailuropoda melanoleuca (giant panda): 100470504 Help Entry 100470504         CDS       T01329                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism aml  Ailuropoda melanoleuca (giant panda) Brite KEGG Orthology (KO) [BR:aml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:aml03000]     100470504 (RC3H1)    04121 Ubiquitin system [BR:aml04121]     100470504 (RC3H1) Transcription factors [BR:aml03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     100470504 (RC3H1) Ubiquitin system [BR:aml04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     100470504 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  100470504 NCBI-ProteinID:  XP_002916999 Ensembl:  ENSAMEG00000015657 UniProt:  D2H5I4 LinkDB All DBs Position 8:complement(77638541..77701905) Genome browser AA seq 1132 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE GAVDLPSRKTPALPNGIVSAGNTVTQLIPRGTDATYDSSLKPGKIDHLSSSAPGSPPDLL ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA PPFEPAPYQQGMYYTTPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP VAPHPTQIRPSYMRDPPYSRLPPPAQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAVGSAEM MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQALA PQGAPTKPINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERMSMSEVASHGKPLPS AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAGQSQPPPPPPKWPGMIS SEQLSLELHQVEREIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQNKVSAEDLTL TFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRAGVTPTSAP NT seq 3399 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggatttcctctcctgcccgatttgcactcagact ttcgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac attgagctcctccccgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag cagcagcccattaccttgtgtagtggagttgaagatacaaagcattatgaggaagccaag aaatgtgtcgaagaattagcattgtacctgaaaccactcagcagtgctcgaggagtgggt ctgaatagcactactcagagtgttctcagtcgcccaatgcagaggaagctggtgactctg gtccactgccagctagtggaagaagaaggcaggattcgtgctatgagagcagctcgatct ttaggtgaacgaacagttacggaactcattcttcagcaccagaatcctcagcaactctcc tctaatctttgggcagcagtcagggctaggggttgccagttccttggaccagcaatgcag gaggaagccctaaagctggttctcctggccttggaagatggttctgctttgtcaaggaaa gtattggttctctttgtggtgcaaaggttggagccgcggtttcctcaggcctctaaaact agcattgggcatgttgtccagctcctttatagagcttcctgcttcaaggtcaccaaacgt gatgaggattcttctttgatgcagctaaaagaagaatttagaacctacgaagctctgcgg cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca gaccaatggtcctctttgctttatggagaccagtctcacaagtctcatatgcagtcaatt attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctattg gcaaacattgaccctagtccagacgctcctcctcctacttgggagcagctagaaaacggg ctggttgctgtgcggaccgtggtacatgggctagtagactatatccagaaccatagcaaa aagggagcagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga gatatgaagcagagaggaggatgccctcgtggggccagctgtacgtttgcacactcacag gaggaattggagaagtttcgtaaaatgaacaaacgcctagttcccagaagacccctgagt gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctgtccttccagatgaa ggtgcagtggatctgcctagcagaaaaacccctgctctgccaaatggaattgtgtcagca gggaatacagtaacacagctgattccacgagggacagacgccacctacgattctagtctg aaaccgggaaagatagatcatctgagcagtagtgcccctggatctcctcctgacttgcta gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg gggccgacagacttgcctcctatgccagtcaccaaaccactgcagatggtaccacgaggc tctcagttatatccagcacaacagacagatgtttactatcaggatcctcgaggagctgct ccaccatttgaaccagcaccttatcagcagggtatgtactatactacaccaccacagtgt gtatctcgttttgtcagacctccaccatctgctcctgaacctggtcctccctacttggat cattatccaccatatctccaagatcgtgtagtaaactctcagtatggcacacagccacaa cagtacccacctatgtacccaccacactatgatggccgccgagtataccctgctcagtct tatgcaagagaggagatttttcgagaaagccctatacccattgagattccacctgcagca gtaccatcctatgtaccagaatccagagaaagataccagcagatggagggttactatccc gtggctcctcatccaactcaaatcagaccttcgtacatgagagaccctccttatagccgg cttcctcctcctgctcagccccatcctagtctggatgagctacatcgcagacgaaaggaa ataatggcccagctagaggaaaggaaggttatctctccacctccttttgcaccttcccca acattgcctcctacctttcatcaagaggaatttttggatgaagacttgaaggtagctggg aaatacaaaggaaatgattatagccaatattctccttggtcatgtgacaccatcggctcc tacattggaaccaaagatgcaaaacccaaagatgtggtggcagtggggagtgcggaaatg atgaatgtggagagtaaaggaatgagagatcagcgactggatcttcagagacgagcagca gaaaccagtgatgatgaccttatcccattcggagaccgaccaaccgtatctcggtttggt gccatctctcgaacctccaaaacaatatatcagggtgctggtcccatgcaggctctggca cctcagggagctcccacaaaacctattaatatttcagattacagtccatatggaacccat ggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc agtgagagggagagaatgtccatgtcagaagtggccagtcatggaaaaccccttccatct gctgagagggaacagctacgactagaattgcaacaactaaaccatcaaatcagccaacag actcagctacgtggactagaggctgttagtaacaggctggtgttacagagggaggtgaac accctggcaggccagtcacagcccccgccaccacctccaaaatggcctggaatgatttca agtgagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaacccgg gaactgagtttggagaaccaatgttctctggacatgaaaagcaaattgaatacaagtaag caagctgaaaatggacaaccagaaccacaaaataaggtttccgctgaggaccttacattg acattcagtgatgtaccaaatggctcagctttgacacaagagaatatcagccttctgtca aacaagaccagctctctgaacctgtcagaggaccctgagggaggaggtgacaacaatgac tcccagagagcgggagtcacacccacttctgctccctaa

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