Ailuropoda melanoleuca (giant panda): 100470890
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Entry
100470890 CDS
T01329
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml03015
mRNA surveillance pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100470890 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
100470890 (ACIN1)
03015 mRNA surveillance pathway
100470890 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100470890 (ACIN1)
03041 Spliceosome [BR:
aml03041
]
100470890 (ACIN1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100470890 (ACIN1)
Spliceosome [BR:
aml03041
]
Complex C
Other components
EJC/TREX
100470890 (ACIN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100470890
NCBI-ProteinID:
XP_002926053
Ensembl:
ENSAMEG00000007576
UniProt:
G1LM31
LinkDB
All DBs
Position
20
Genome browser
AA seq
1340 aa
AA seq
DB search
MWRRKFPSRSGGTRGVLSGNRGVECGSGRGQPGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSVSEEKGESDDDKPRKGERRSPRVRQARAAKLS
ECSQVAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEEEEGQKSRDAPVVK
QFEQVEEGEEMPRAKPEAVIDERPQTMRSQEQEGLERGGRVTRSQEEARRSHMARHQQEK
EMKTISPLEEEEKEIKSSKVLEEKSKSPSPPRLTEDLQKAPLVLQPEQNASEEETPPPLL
TKEASSPPPNTQLQSEEEIEPMEGPAPPVLTQLSPPNTDAEARELLISQHTVQVVGGLSP
LSSPVDTKAESLAEKVPEESVLPLVQKSTLAECSTQKGLETESEKSAQPLPLKIEELAPA
KGITEESLKHLSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSRSRSRSPDSSG
SQSHSSPRSKQRDVSRARTHTNPRGRSEMGSRSTSESRSRSRSRSRSASSNSRKSLSPGV
SRDSSTSYTETKDPSSGQEVATPPVPQLQVLEPKERTSTSSSIRVRRLSQPEPAEKHVTQ
RLQPERGSPKKCDAEEAEPPAATQPQTPETQTAQLPESGRIPRTVEEKEEVTMDTSENRP
ENEVPEPPVPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTE
GGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDE
TERNGDDGTHDKGLKICRTVTQVVPAEGQENGQRGEEEEEKEPEAETPLPPQVSVEAALP
PPAEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVR
PFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKF
LCADYAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERA
VREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEK
AQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQK
EREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDT
KRHSRSRSRSTPVRDRGGRR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaattcccgagcagatccggaggaacccggggagttctgagtggtaat
cgaggggttgagtgtggcagtgggcggggtcagcccggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagcgaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaagagctacttaggcagcgtctggagcgtgaagcccgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcgcccagaaaaagctcctctgtttctgaagagaaaggtgaatctgatgatgataaa
ccaaggaaaggagaaagacgatcacccagggtcagacaggcaagagcagctaaactttct
gagtgtagccaggtggctgaggaggaagaggatcaagaaacaccttccagaaatctgagg
gtcagagcagatcgcaatttgaaaacagaagaggaagaagaggaggaggaagaggaagaa
gaggaggaagaggaagaggaagaggaaggacaaaaatctagggatgcaccagtcgtgaaa
cagtttgagcaggtagaagagggggaagagatgcccagagcaaaaccagaggcggtgata
gatgagagaccccaaaccatgagatcccaggaacaggaggggttagagagaggaggaaga
gtcacaaggtcccaggaagaagccagaagaagtcatatggccagacatcagcaggagaaa
gaaatgaaaacaatttctccccttgaggaagaagaaaaggaaataaaatcttcaaaagtc
ttggaggaaaaatcaaagtccccttcccctcctcgactgactgaagatctgcagaaggcc
cctcttgtgctgcaaccagagcagaatgccagtgaggaggaaactcccccacctttactt
accaaggaagcatcttcaccaccacctaacacacaactccagagtgaagaagaaatagag
cccatggaaggcccagctccccctgtcctcactcagctgtctcctcctaatacagatgct
gaggccagggagctgttaatatctcagcatactgtccaggtggtgggaggcctgtctcct
ttgtcaagtcctgtagacaccaaagcagaatctttagcagagaaagtgccagaggagagt
gtcctgcctctagttcagaaaagcacactagctgaatgctcaacccagaagggtcttgaa
actgagtcagaaaaatctgctcaaccactccctcttaaaatcgaggaattagcaccagcc
aaagggattactgaggaatctctgaaacatctgtctttggaacagaaggaaggtagaagg
gcttctcatacccttctcccaagccacaggttgaaacagtcagctgactcctcctcaagc
cggtcctcctcttcatcctccagttctagatcaagatctcgctctcctgacagctcaggc
tctcagtctcactcatctccacgatccaagcagagagatgtatctcgggcacgtactcac
accaaccctcgtggtagatccgagatgggctcccgatcaacatcagagtccaggtctcgt
tcccgttcccgttcccgttcagcttcaagcaacagcagaaaatctctgagccctggagtc
tccagggacagcagcaccagctacactgaaaccaaagatccctcttctggtcaggaggtt
gcaactccaccagtgccacaactgcaggtccttgagccaaaggagaggacttccacctca
tcctctatccgagtgaggcgtttgagccaacctgagccagctgaaaagcatgtgacccag
aggttacaacctgagcgggggagcccaaagaagtgtgacgctgaagaggcagagccgcca
gctgccacacagccccagaccccagagacccagaccgctcagctgccagaatcaggaagg
attccccgcactgttgaggagaaggaggaagtgacgatggacacaagtgaaaacagacct
gaaaatgaggttccagaaccccccgtgcctattgcagaccaagtcagcaatgatgaccgc
ccagagggcagtgctgaagatgaggagaagaaagagagctcgctgcccaaatcattcaag
aggaagatctccgttgtctcagctaccaagggggtgccagctggaaacagtgacacagag
gggggccagcctggtcggaagcggcgttggggagccagcacagccaccacacagaagaaa
ccctccatcagtatcaccaccgagtcactcaagagcctcatccccgacatcaaacccctg
gcggggcaggaggctattgtggatcttcatgctgacgactcccgaatctctgaggatgag
acagagcgtaatggtgacgatggaacccatgacaaggggctgaagatatgccggactgtc
acccaggtagtgcctgcagagggccaggagaacggccaaaggggagaagaggaggaggag
aaggagcctgaagcagaaacccctctgcctccccaggtgtcggtagaggcggccttgccc
ccgcctgcggagcatgaagtaaagaaagtaactttaggagataccttaactcggcgttcc
attagccagcaaaagtctggagtttccattacaattgatgacccagtccgaactgctcag
gtgccctccccgccccggggcaagatcagtaacatcgtccacatctccaatttggtgcgt
cccttcactttaggccaactaaaggaattgttgggccggacaggaactctggtggaagag
gccttctggattgacaagatcaaatctcactgctttgtaacgtattcaacagtagaggaa
gcagttgccacccgcacagctctacatggggtcaaatggccccagtccaatcccaaattc
ctttgtgctgactatgccgagcaagatgagctggattatcaccggggcctcttggtggac
cgtccctctgaaactaagacagaggagcagggggtaccacggcccctgcaccccccgccc
ccacccccagcccagccaccacagcatccccgggcagagcagcgggagcaggagcgggcg
gtgcgggagcagtgggcagagcgggaacgggaaatggaacggcgggagcgaactcgatca
gagcgtgaatgggatcgggacaaagttcgagaagggccccgttcccgatcgcggtcccgt
gaccgccgccgcaaggaacgtgcgaagtctaaagaaaagaagagtgagaagaaagagaaa
gctcaggaggaaccgcctgccaagctgctggacgaccttttccgtaagaccaaggcagct
ccctgcatctattggctcccgctgactgacagccagattgttcagaaggaggcagagcgg
gctgaacgggccaaggagcgggagaagcggcgaaaggagcaagaagaggaagagcaaaag
gagcgggagaaggaagcagaacgggaacggaaccgacagctggagcgggagaagcgtcga
gagcacagccgagagagggacagggaaagagagagggaaagggagcgtgacaggggtgat
cgagatcgggatagggagagggaccgggagcgaggcagggagagggaccgcagagacacc
aagcgccacagcaggagccggagtcggagcacacctgtgcgggaccggggtgggcgccgc
tag
DBGET
integrated database retrieval system
