KEGG   Ailuropoda melanoleuca (giant panda): 100470934
Entry
100470934         CDS       T01329                                 
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
  KO
K11478  protein Jumonji
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03083  Polycomb repressive complex
aml04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100470934 (JARID2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100470934 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100470934 (JARID2)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100470934 (JARID2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     100470934 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 100470934
NCBI-ProteinID: XP_034516186
Ensembl: ENSAMEG00000000339
LinkDB
Position
5:complement(11221357..11392904)
AA seq 1077 aa
MVYFGSSQDEEDVEEEDDETEDVKTATNNSSTSCQSTPRKGKTHKHVHNGHVFNGSSRSS
REKEPVQKHKSKEATPGKEKHSDHRADSRREQASAAHPPAAPSTGSSAKGLAANHHHPPL
HRSAQDLRKQVSKVNGVTRMSSLGTSATSAKKMREVRPSPSKTVKYTATVTKGTVTYTKA
KRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGHAVNGLKVSGR
LNPKSCTKEVGGRQLREGLRNSKRRLEEAQQAEKPQSPPKKMKGTAGSAEAPGRKAAAAP
VLPAPADKALLHGHVKKEVPERSLERNRPKRATAGKSAPGRQAHGKTDGASCENRSTSQT
EPLHKPHEAAAKPDKGGGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRV
IPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIG
GCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYD
SLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTEHDYNRFHPLPRFEPKNGLINGVAHRNG
FRSKLKEVGQAQLKTGRRRLFAQEKEVAREEEEDKGVLSDFHKCIYKGRSVSLTTFYRTA
RNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHG
WNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIW
YCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLCREGIKVHRTVQQSGQFVV
CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAE
AKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDSNGAMADGKKKPRKW
LQLETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQI
ISLVNQICGKVSGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSSSSSSKSASSSS
NT seq 3234 nt   +upstreamnt  +downstreamnt
atggtatatttcggaagctctcaggacgaggaggacgtcgaggaggaagacgatgagacg
gaagacgtcaaaacagccaccaacaattcttcaacttcatgccagtctacccccaggaaa
ggaaaaacccacaagcatgttcacaacgggcatgttttcaatggttccagcaggtcatca
cgggagaaagaacctgttcaaaaacacaaaagcaaagaggccactcccgggaaggagaag
cacagcgatcaccgggctgacagccggagggaacaggcctcagcggcccaccccccagcg
gccccatccacgggctcctcggccaaggggctcgctgctaaccaccaccacccccctctg
catcggtcggctcaggacttacggaaacaggtttcgaaggtaaatggagtcactcgaatg
tcatctctgggtacaagtgcaaccagtgccaaaaagatgcgcgaagtcagaccttcaccg
tccaaaactgtgaagtacactgcaacggtgacgaaggggactgtcacatacaccaaagcc
aagagagaactggtcaaggaaaccaaacccaatcaccacaagcccagttccgctgtcaac
cacacaatctcagggaaaactgaaagtagcaatgcaaaaacccgcaaacaggtgctatcc
ctcgggggggcgtccaagtccaccgggcacgccgtcaatggcctcaaggtcagtggcagg
ttgaacccaaagtcatgcactaaggaggtgggggggcggcagctgagggaggggctgcgg
aactccaagaggagactggaagaggcacagcaggccgagaagccgcagtccccgcccaag
aagatgaaagggacggccggctctgccgaggcccccggcagaaaggcggcggcggctccc
gtgttgccggcccccgcggacaaggctctgctgcacgggcacgtgaagaaggaagtgcct
gagcgcagcctggaaaggaaccggccgaagcgggccacggccggcaagagcgcgccaggc
aggcaagcacacggcaagacggacggcgcctcctgtgaaaatcgttctacctcgcaaacg
gagcccttgcacaagccgcacgaggcggcggccaagcctgacaaggggggcggccgggcc
ggctgggcggccatggacgagatccccgtgctcaggccgtccgccaaggagttccacgac
ccgctcgtctacatcgagtcggtccgcgctcaggtggagaagtacggcatgtgcagggtg
atcccccctccggactggcggcccgagtgcaagctcaacgacgagatgcggttcgtgacg
cagattcagcacatccacaagctgggccggcgctggggccccaacgtgcagcggctggcc
tgcatcaagaagcacctcagatctcagggcatcactatggacgagctcccgctcatagga
ggctgcgagctcgacctggcctgctttttccggctgattaacgagatgggcggcatgcag
caagtgactgacctcaaaaaatggaacaaactagcagacatgctgcgcatccccaaaact
gcccaggaccggctggccaagctccaggaagcctactgccagtacctgctctcctacgac
tccctgtcccccgaagagcaccggcgactggagaaggaggtgctgatggagaaggagatc
ctggagaagcggaaggggcccctcgagggccacacggagcacgactacaacaggttccac
cccctgccccgctttgagcccaagaacgggctcatcaacggcgtggcccacaggaacggc
ttccgcagcaagctcaaagaggtgggccaggcccagctcaagacgggccggcggcgactc
tttgctcaggaaaaggaagtggcgcgagaggaggaggaggacaaaggcgtcctcagtgac
ttccacaagtgcatatacaagggaaggtctgtttctttaacgactttttatcgaacagca
agaaatatcatgaacatgtgcttcagcaaggagcccgcaccagctgaaatcgagcaagag
tactggaggttagtggaagagaaggactgccacgtagccgtgcactgcggcaaggtagac
accaacactcacggcagcgggttcccggtggggaagtcagaaccgttttcaaggcatgga
tggaacctcaccgtcctccccaataacacagggtccatcctgcgtcacctcggtgctgtg
cctggagtgacaattccctggctgaacattggcatggtcttttctacctcatgctggtct
cgagaccaaaaccaccttccctatattgactacttacacactggtgctgactgcatttgg
tattgcattcctgctgaggaggagaacaagctcgaggatgtggtccacaccctgctgcag
gccaacggtaccccagggctgcagatgctggaaagcaacgtcatgatctccccggaggtg
ctgtgcagagaggggatcaaggtgcacaggacggtgcagcagagcggccagttcgtcgtc
tgcttcccgggctcctttgtgtccaaagtgtgctgcggctacagcgtctccgagaccgtg
cactttgccaccacccagtggacgagtatgggcttcgagacggccaaggaaatgaagcgt
cgccatatagctaagccattctccatggagaagttactctaccagattgcacaagcggaa
gcgaaaaaggaaaacggccccactctcagtaccatctccgcccttctggatgagctcagg
gatacggagctgcggcagcggcggcagctgtttgaggccggcctccactcgtctgcccgc
tacggcagccacgacagcaacggcgccatggcggatggcaagaaaaagcctcgaaagtgg
ctgcagttggagacgtcggagaggaggtgtcaggtctgccagcacctgtgctacttgtcc
atggtcgtgcaggagaatgagaacgtggtgttctgcctggagtgcgctctgcgccacgtg
gagaagcagaagtcctgtcgagggctgaagctgatgtaccgctacgatgaggagcagatc
atcagtctggtcaatcagatctgtggcaaagtgtctggtaagaacggcagcattgagaac
tgtctcagtaaacctacaccaaaaagagggccccgcaagagagcgaccgtggacgtgccg
ccatcccggctttcatcctccagttcatccaaaagtgcttcgagctcgtcgtga

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