Ailuropoda melanoleuca (giant panda): 100471027
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Entry
100471027 CDS
T01329
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X6
KO
K16578
CLIP-associating protein 1/2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100471027 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100471027 (CLASP1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100471027 (CLASP1)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100471027 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
Cnd1
Sec7-like_HUS
HEAT_2
RTP1_C1
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
100471027
NCBI-ProteinID:
XP_019657880
Ensembl:
ENSAMEG00000005084
LinkDB
All DBs
Position
2:98162403..98426561
Genome browser
AA seq
1519 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCLCLVATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSASGATPFSSAAALPPGSYASLESRHVREDTESIGLDADGTSTKA
EGRIRTRRQSSGSATNVTTTPDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSG
YGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQAGRIPGSVNAMR
VLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRN
GGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRM
FADPHSKIADSEPEYEDKEGNLFPSEGSCTRVFSMFLETLVDFIIIHKDDLQDWLFVLLT
QLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKY
IESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTML
LGALPKTFQDGATKLLHNHLKNASNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGG
LSPSMLEYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGG
VASPATEGRGGSDVVEGGRTALDNKTSLLNTQPPRAFPGPRVRDYNPYPYSDTINTYDKT
ALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGV
WEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDS
HKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLL
QLLADIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIK
RAQTTNSNSSSSSDVSTHS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgcatggagtcctgcctggcacaggtgttgcagaaggatgtgggcaaacga
ctgcaggttggccaagaacttatagactatttctcagacaaacagaagtctgctgacctt
gaacatgaccagaccatgttagataaacttgtggatgggcttgctacctcttgggtgaac
tcgagcaattacaaggtggttcttctcggcatggacattctgtccgcgctggtcacccgg
ctgcaggatcggttcaaggcgcagattggcacagtgctgccaagtttaatagacagactg
ggagatgctaaagactctgtgcgagagcaagaccaaactctgctgctgaagatcatggat
caagctgctaatccccagtacgtgtgggaccgaatgctgggaggcttcaagcacaagaat
ttccggactcgggaaggcacgtgcctctgccttgttgccacactcaatgcctctggagca
catactttaacactaagcaagattgtgccacatatatgtaatttacttggagatccaaac
agccaggttcgagacgcagcaataaacagcttagtggagatttacagacacgtgggagaa
cgtgtgagggcagacctcagtaaaaaaggattgccgcagtcccggttgaatgtaattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacaatcagcaaatgataaaaat
tttgatgatgaagattctgtggatggtaatagaccttcctctgctagttctacgtcatcc
aaagctccacccagctcccggagaaacgttggaatggggaccacccgccggcttgggtca
tccactcttggatccaagtcttcagctgcaaaagaaggagctggtgctgttgacgaagag
gactttattaaggcctttgatgatgtacctgtggtgcagatttattccagccgagacctt
gaggaatccataaacaagattagggaaatactatctgacgacaagcatgattgggagcaa
agagtaaatgctttaaaaaagataagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatttgcgtcttttggatggagcttttaaactatctgctaaggacctg
cggtctcaggtagtgcgggaggcttgtatcacactggggcatctgtcatcagttctggga
aataagtttgaccatggagctgaagccattatgccaactatctttaatttaattccaaat
agtgccaaaattatggccacttccggtgttgtagctgttaggttaatcattcggcacaca
cacatccctaggctaatacctgtcataacaagcaactgtacctctaagtctgttgcagtt
agaaggcgctgttttgaatttttagatttacttttacaagagtggcagacacattcactg
gaacgacatatatcagtattagccgaaacaataaagaagggaatacatgatgcggattcc
gaagcaaggatagaagccagaaagtgctactggggttttcacagtcacttcagcagagaa
gcagagcacttgtaccacaccctcgagtcctcctaccagaaggccctgcagtcccacctg
aagaactccgacagcattgtgtctctgccgcagtccgaccgctcgtcctcgagctctcag
gagagtctgaaccggccgctctctgccaaaagaagtcctactggaagcaccacctctaga
gcttctacagttagtaccaaatccgtgtcaacgactgggtccctccagcgatctcgaagc
gatattgacgtgaacgcagcagccagtgccaagtccaaggtgtcctcggcctcgggtgct
acgcctttcagctctgcagcagccttgcctcccgggtcatacgcttccttagagtccaga
cacgtgagggaagatacggagtccataggccttgacgcagacggtacttccactaaagcg
gagggtcggatccgcacgcgacggcagagctccgggagcgccaccaatgtcaccaccaca
cctgacagtcgaggccgcagtcgcgccaaagtggtttcacagtcccagcgatccagatct
gctaatcctgctggtgctggcagccggtcaagctccccagggaaattgttgggaagtggt
tatggtggccttgctgggggttcctcaagaggcccacctgtgaccccctcttcagaaaaa
cgaagcaaaattcccaggagtcagggatgtagccgagaaacaagtccaaaccgaatagga
ttagaccggtttgggcttggccaggcaggaagaatacctggctctgtgaatgccatgcga
gttttgagcacgagtacagacctcgaagctgccgttgccgatgctttgctgttaggagac
tccaggagcaagaagaagcctgtgaggaggagatacgagccgtatgggatgtactctgac
gatgacgccaacagcgatgcctcgagtgtttgctctgaacgctcatacggctccaggaat
ggtggcattccccattatctgcggcagaccgaggatgtagcagaagttctcaaccactgc
gcaagttccaactggtcagaaaggaaagaagggcttctaggcctgcagaacttactgaag
agccaaagaacactgagtcgagtagaattgaaaagattgtgtgagatcttcacccgaatg
tttgctgaccctcacagcaagattgctgattcagaaccagaatatgaggataaagaagga
aatttgtttccatcagaaggctcttgtacaagagttttcagtatgtttttggagactctt
gtggattttataataattcataaggatgacttgcaggactggctttttgttcttctcaca
caattgcttaagaaaatgggagcagatttacttggatctgtgcaagcaaaagttcagaag
gctctagatgtcacaagggactcctttccatttgatcaacaatttaacattttgatgaga
tttattgtggatcaaactcaaactcctaacctcaaggtcaaagttgcaatcctgaagtac
attgagtctcttgctcggcagatggacccaacagattttgtaaactccagtgagacgagg
cttgctgtttctagaattataacctggacgacagaaccaaagagttcagacgtgagaaag
gcagcacaaattgtgctgatctctctgtttgaattgaacactcctgaatttaccatgtta
cttggtgccttgccaaaaacattccaggatggtgccaccaaactcctgcataaccacctc
aagaacgctagcaacaccagtgtgggctctccgagcaatacaattggccggactccctcc
cgacacaccagcagcaggaccagccccctgacctcacccaccaactgttcccatgggggc
ctatctcccagcatgctggagtatgatacagagaacctgaactctgaagaaatttatagt
tctctgcgtggagttacggaagccattgaaaagtttagttttcgaagccaagaggatctg
aatgagccaattaaacgagatggcaagaaggactgtgatattgtgtctcgtgatggtgga
gttgcctcgcctgccactgagggccggggaggcagcgatgtggtggaaggaggcagaaca
gctctggataacaagacgtccctcctcaatacccagcctccgcgcgcattcccagggccg
cgggtgcgagactacaatccgtacccctactccgacaccatcaacacctatgacaagaca
gccctgaaggaggccgtgtttgatgatgacatggagcagcttcgagatgtgcccattgac
cattctgacttggtggccgaccttctgaaagagctgtccaaccacaacgagcgggtggag
gaacggaaaggcgccctgctggagctgctcaagatcacccgggaagacagcctgggcgtc
tgggaggagcacttcaagaccattctgctcctgctgctggagacgctcggggacaaagac
cattccatccgagcgctagcattgagagttttacgggaaattctgagaaaccagccagca
agatttaaaaactacgccgagctgaccattatgaagactctggaagcccataaagattcc
cataaggaggtagtgagagcggccgaggaggcggcatccacgctggccagctccatccac
ccagagcagtgcatcaaagtcctgtgtcccatcatccagacagctgactaccccatcaac
ctcgccgccatcaagatgcagaccaaagtcgtcgagaggatcgccaaggagtccttgctg
cagctcctcgccgacatcatccccggcttgctgcagggttatgacaacaccgaaagcagt
gtgcgtaaggccagcgtgttttgcttagtggcaatttattccgtaattggagaagagctg
aaacctcacctcgcacagctcacggggagcaagatgaagctactaaacttatatataaag
agggcccagaccacgaacagcaacagcagcagctcctccgacgtgtccacacacagctaa
DBGET
integrated database retrieval system
