KEGG   Ailuropoda melanoleuca (giant panda): 100471138
Entry
100471138         CDS       T01329                                 
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
  KO
K24357  collagen type XX alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100471138 (COL20A1)
SSDB
Motif
Pfam: VWA fn3 Collagen VWA_2 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 100471138
NCBI-ProteinID: XP_034497453
LinkDB
Position
13:complement(45647399..45673647)
AA seq 1020 aa
MWPKGLSSHRQCAMSGLLCPHLGLCLWLWLGVALGRGQGQAGSHLRLAVLPEDRLQMKWS
GSEGSSLGYLLQVKPMAGDTEQEVMLTTKTPKATVGGLSPFKGYTVQIFELTRSGNSLLA
QREFVIADLKSHSVSRSSRKPLEAGMQPTPSHGGSPDPGPQVAWSPSQDLPTLASPHFRC
TPPTPVDMIFLVDGSWSIGHSHFQQVKDFLASVIEPFEIGPNKVQVGLTQYSGDPQTEWD
LNAFRTKEVVLAAVYSLRYKGGNTFTGLALTHVREQNLKPGAGPRPEAAKVVILVTDGKS
QDDARAAGRILKDLGVAVFAVGEQPPAVGWGSHSRWGSLQSHFPPRAGGPVVSMPQGGPV
PAPRSWEHPRALGGGTQCGASEQSPEFTVQCVNGPLEVCPTHGAAGARRPRDLIPQQNVV
GYVLAFLRPALSELLGAAFLTARRSPPSDLALAPESPSSLRVSWTPPSGHVLHYRLTYML
ASGSGPEKSISVPGPRSHVTLPDLLAATKYRVLVSAVYGAGESMAVFAIGRTACPTLSPD
GPLSGFDLMAAFGLVEKEYASIRGVAMERSAFGCARTFTLFKDAQLTRRASDLQLAAPPP
EHTVVFLLRVLPETPRETFALWQMTAEDFQPVLGVPLDAGRKSLTYFNHDPRATLQEVTF
DLPEVRRIFFGSFHKVHVAVGLSKVRLYVDCWKVAERPIGEAGSPPAAGFVMLGRLAKAR
GPRSSSATFQLQTLQIVCSDSWAEEDMCCELPVAKDGETRPAFPSACTCSSQTPGPPGPQ
GPPGLPGRNGAPGEQGFPGPRGPPGVKGEKGDHGLPGLQGYPGQQGAPGKVGLQGPKGMR
GLEGSAGLPGPPGPRGFQGMAGARGTSGERGPPGAVGPTKRTSAAGPSARDPPRGHRTSA
PAYVRTEVLTSEIRVPAPMRGLEPPTRHAGMAAQMAPYEAGGATMPGLRPSGLCTLLLGV
RTFQAPVGSGVTGAPGDREGEGVAAALGLTQPSVTADGDPRLGLAAARPLGCLVTVCSLS
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgtggccgaaaggcctctcttcgcacaggcagtgtgccatgagcggcctcttgtgcccc
cacctcgggctctgcctctggctgtggctgggtgttgccctgggacgcggccagggacaa
gcgggcagccacctgaggctggcagtgctgcctgaggaccggctgcagatgaagtggagt
gggtcggaggggagcagcctcgggtacctgctgcaggtgaagcccatggcaggggacacg
gaacaggaggtgatgctgaccaccaagacccccaaggccacagtggggggcttgagcccc
ttcaagggctacaccgtgcagatcttcgagctcaccaggtcagggaacagcctgctggca
cagagggagtttgtgattgcggatttgaagagtcactctgtgagcaggagcagtcggaag
ccactggaggcaggcatgcagcccacgccctcccacggggggagcccagaccctgggccc
caagttgcctggtccccaagccaagacctgcctactcttgccagcccccacttccgctgc
acaccccctacacccgtggacatgatctttctggtggacgggtcctggagtattggccac
agtcatttccagcaggtcaaagatttcctggccagtgtcatcgagccctttgaaattggg
ccaaataaagtccaagtcggcctgactcagtacagtggagacccccagactgagtgggac
ctcaacgccttccgcaccaaggaggtggtgctggcagccgtctacagcctccgctacaaa
gggggaaacacattcacaggcctggccctgactcacgtgcgggagcagaacctgaagccc
ggtgcggggccccgtccagaggcggccaaggtggtgatcctagtgacggacggcaagtcc
caggatgatgcccgtgctgctggccgcatcctcaaggacctgggtgttgccgtctttgct
gtgggtgagcagcccccagctgtcggctggggttctcacagccgttggggcagtttgcaa
tcccacttcccgccccgggctggaggtccggtggtgtctatgccacagggaggacctgtc
cctgctccgaggagctgggagcacccgcgggcgctcggagggggcacacaatgtggggct
tctgagcagagccccgagttcacagtgcagtgtgtgaatggccccctcgaggtgtgtccc
acgcacggtgccgcaggcgccaggcgcccccgtgacctcattccgcagcagaatgtggtg
ggatacgtgctggccttcctccggcccgccctctctgagctcctgggtgctgccttcctc
acagcacgccggagcccaccctccgacctggccctggctcccgagtcacccagcagcctg
cgggtcagctggacgcccccaagtggccatgtcctccactaccggctcacctacatgctg
gcctcgggctcaggacccgagaagtcgatctctgttccaggacccaggagccacgtgact
ctgcctgacctgctggcagccaccaaatacagggtcctggtctcagcagtctacggagca
ggggagagtatggcagtatttgccataggccggacggcctgccccaccctcagccccgat
ggccccctctcaggctttgacctcatggcggccttcggcctggtggagaaggagtacgcc
tccatccgcggtgttgccatggagcgctcggcgttcggctgtgccaggaccttcacgctc
ttcaaggatgctcagctgacccgccgggccagtgacctccagctggccgcccccccgccc
gagcatacggtggtcttcctgctgcgtgtgctgcctgagactccccgcgagaccttcgcg
ctgtggcagatgacggccgaggacttccagcctgtcctgggggtcccgctggacgctggc
aggaagtctctgacctacttcaaccacgaccccagggccaccttgcaagaggtcactttt
gacctgcctgaagtgaggaggatattctttggaagcttccataaggtgcacgtggccgtg
ggcctctccaaggtcaggctctacgtggactgctggaaggtggccgagaggcccattggg
gaggcgggcagcccacctgccgcaggtttcgtgatgctggggaggttggccaaggcccgg
ggcccccggagcagctcagccacattccagctccagacattgcagatcgtgtgcagcgac
tcctgggccgaggaggacatgtgctgcgaactccccgtggcgaaggatggagagacccgc
cctgccttcccttctgcctgcacctgttcctcgcagacccctgggccccccgggccccaa
ggacctccgggcctccctggaaggaacggagccccaggagagcagggcttcccagggccc
aggggtccgccaggggtcaaaggagagaaaggggaccatgggcttccgggcttgcagggc
tatcccggtcagcagggtgcccccgggaaggtcggcctccagggaccaaagggaatgcga
ggcctggaggggagcgctggcctgcctggacctcctggcccgaggggcttccaaggcatg
gcaggagccaggggcaccagcggggagagaggacccccaggggccgtagggcccacaaaa
agaacatcggcggccgggcccagtgccagggaccctccccgcggccaccgcacgtctgca
cccgcttatgtaaggactgaagtgcttacatctgaaatccgtgtcccggcccctatgcgg
ggcctggagccccccacccgccacgcgggcatggctgcccagatggcgccctacgaggca
ggtggggcaacaatgcccggacttagaccctcgggtctctgcaccctgctcctgggcgtg
aggaccttccaggccccagtcgggtccggtgtcaccggtgccccaggggacagggagggc
gagggtgtggctgcggccctggggctcacgcagcccagcgtcactgccgacggggacccg
cggttggggctggcagcagcaaggcccctcggatgcttggtcaccgtctgctccctctcc
tga

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