Ailuropoda melanoleuca (giant panda): 100471163
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Entry
100471163 CDS
T01329
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100471163 (SMARCAL1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100471163 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
W02B3_4_N
Motif
Other DBs
NCBI-GeneID:
100471163
NCBI-ProteinID:
XP_011232126
Ensembl:
ENSAMEG00000003379
UniProt:
G1L9L8
LinkDB
All DBs
Position
2:178759865..178817011
Genome browser
AA seq
959 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQSPGFGSSIATNSSQSKQGPTPNLPRD
PSKPVNHGVVFLQQNLNSSSNGDQRPPNSHSFHLSSPEQAKGIWKRQEDVSPACPRHGPS
GQMTLTGISPPLAQSPPEVPTQQLLGGTLGQGHPQASQEIKSTPFANTAHEPLAKAKSFQ
KTLTPFFRQPPRDPGVEAKAVRPSTSGQNISDTNCGSGSATPGTEGRRPQKLGASLHKAG
SSQKGMCIRSGDRFQVKIGYNAELIAVFKRLPSRSYDPATKTWNFSMTDYGALMRAAQSL
PTVTLEPLEGEDSRESLSTGSVAHACLPSAPSLAFVKGQCVLISRARFEADIGYSEDLMA
LFKQMESRSYDVKTRKWNFLLEEHNKLIQSVRCLPQVQLDPLPTTLTLAFASQLEKTSPC
LTEPIPEADLSGVDPKLVSNLLPFQRAGVNFAVAKRGRLLLADDMGLGKTIQAICIAAFY
RKEWPLLVVVPSSVRFTWEQAFLQWLPSLSPDRINVVVTGKDRLTAGLVNIVSFDLLSKL
EKQLKTPFKVVIIDESHFLKNIKTARCRAAMPLLKVAKRVILLSGTPAMSRPSELYTQII
GVRPTFFPQFHAFGLRYCDAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKCDVLAQLP
PKQRKMVVIAPARISTKARAALAAAAKEMTTMNNTKRQQKEALLLFFNRTAEAKIPSVIE
YILDLLESGREKFLVFAHHKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQLFE
KHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLLQAEDRVHRIGQASSVSIHYLVAR
GTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATNYFYKDPKQQKIYDLFQQSFEEDGS
DMELLEAAESFDPGSASGAPGSDSQDLGDSVDEITSTGSPVKKRRFEFFDNFDSFMFPL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaaaatcgaagagaaccgacaaaaggct
ctggcccgtagagctgagaaattattagcagaacagcatcagagcccaggctttggctcc
tccattgccaccaactcttcccagtccaagcagggccctaccccaaacctccccagggat
ccgtctaagccagtgaaccatggtgtcgttttcctgcagcagaatctcaatagttcatct
aatggtgaccaaagacctcctaattcccacagttttcatctaagctctccagagcaggca
aaggggatctggaaaaggcaagaagatgtgtccccagcctgcccgcgccacggcccatca
ggtcaaatgactctcactggcatctctcctcccttggcacagagtcctccagaggtcccc
acccaacagctgttgggtggtacgttaggtcaaggtcatcctcaggcttcacaggagatc
aaatccacaccctttgctaacacagctcatgagcctttggccaaagccaagagtttccag
aagacactaactcctttctttagacagccacccagggatcctggagtagaggccaaggca
gtgaggccctccacctcggggcagaacatttctgacacaaactgtggctcgggaagtgca
acacctgggacagaaggcagacgccctcagaaattgggggcctcactccacaaagcagga
agctcccagaagggaatgtgcataaggagtggggatcgtttccaggtgaagatcgggtac
aatgcagagctcattgcggtttttaagcgtcttcccagcagaagttacgatcctgccacc
aagacatggaacttcagcatgaccgactacggtgccctgatgagagcagcccagagcctc
cccacggtcaccctggagcctttggaaggggaggacagcagggagtcactctccactggg
agcgtggcccatgcctgcctgccttcagctccctccctggccttcgtcaaagggcaatgc
gtgctcatctcccgggcccgcttcgaggcagacatcggctactccgaagacctgatggca
ctgtttaagcagatggagtccagaagttatgatgtcaagaccaggaagtggaactttctc
ttggaagaacacaataaactaatccagagcgtgcgctgccttccacaagttcagctggac
cctctgcccacgacactcaccctggcattcgcgtcgcagctggagaagacctctccctgt
ctcacagagcccatccccgaggccgacctttctggagtggaccccaagctcgtgtccaat
ctgctgcccttccagagagcgggagtcaattttgccgtagcaaagagaggccgcctgctg
ctggctgacgacatgggcctggggaagaccatccaagccatctgtattgcggccttttac
cggaaggagtggccgctcctggtggtggtcccatcatctgtgcgcttcacctgggagcag
gccttccttcagtggctgccgtctctgagcccagaccgcatcaacgtcgtggtgaccggc
aaggaccgcctgacagctggcttggtcaacattgtcagctttgaccttctgagcaagtta
gaaaaacagctaaaaaccccctttaaagttgtcatcattgacgaatctcacttcctcaag
aacatcaagacagcccgctgtcgcgcggccatgcccctcctcaaggttgcgaagagggtg
atcctgctgtccggcacgccagccatgtcccggccctcagagctctacacccagatcatc
ggggtcaggccaactttcttccctcagtttcatgcgtttggacttcgctactgtgatgcc
aagcggcagccctggggatgggattattcgggctcctccaacctcggtgagctgaagctg
ctgctggaggaggcagtcatgctgcgacgcctcaagtgcgatgtccttgcccagctccca
cccaagcagcgcaagatggtagtcattgcccctgcccggatcagcaccaaggccagagcc
gccttggctgctgcggccaaggaaatgaccaccatgaacaacactaaacggcagcagaaa
gaagccctccttctcttcttcaacagaacagctgaagctaaaatcccatctgtcattgaa
tatatcctggacctcctggaaagtggaagagagaagtttctagtgttcgcacaccataag
gtagtcctgagtgcaattacaagagagcttgagagaaagcatgtgccacacatccgcatc
gacggctccacgtcctccgcagaccgagaggacctgtgccagcagttccagctgttcgag
aagcatgccgtggccgtgctgtccatcactgcggccaacatgggcctcaccttctcctcg
gctgacctggtggtgtttgccgagctgttctggaaccctggggtgctgctccaggctgag
gaccgggtgcaccgaatcggacaggcgagctccgtgagcatccactacctcgtggcgaga
ggcacagctgacgactacctctggcccctaattcaagagaagattaaagttctgggtgag
gccggactttctgagaccaatttttcagaaatgacagaagctactaattacttctacaag
gacccaaagcagcagaagatctatgacctcttccagcagtcctttgaggaggacggaagt
gacatggagctcctcgaggcagcggaatcctttgaccccggaagtgcttctggcgcacct
ggaagtgattcccaggacctgggagactcggtggacgaaatcacgtcaacgggcagcccc
gtaaagaaaaggagatttgaattttttgataactttgacagctttatgtttcccctataa
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