KEGG   Ailuropoda melanoleuca (giant panda): 100471530
Entry
100471530         CDS       T01329                                 
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04072  Phospholipase D signaling pathway
aml04140  Autophagy - animal
aml04150  mTOR signaling pathway
aml04151  PI3K-Akt signaling pathway
aml04152  AMPK signaling pathway
aml04211  Longevity regulating pathway
aml04218  Cellular senescence
aml04714  Thermogenesis
aml04910  Insulin signaling pathway
aml05163  Human cytomegalovirus infection
aml05165  Human papillomavirus infection
aml05168  Herpes simplex virus 1 infection
aml05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04072 Phospholipase D signaling pathway
    100471530 (TSC1)
   04151 PI3K-Akt signaling pathway
    100471530 (TSC1)
   04152 AMPK signaling pathway
    100471530 (TSC1)
   04150 mTOR signaling pathway
    100471530 (TSC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100471530 (TSC1)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    100471530 (TSC1)
  09159 Environmental adaptation
   04714 Thermogenesis
    100471530 (TSC1)
 09160 Human Diseases
  09161 Cancer: overview
   05231 Choline metabolism in cancer
    100471530 (TSC1)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    100471530 (TSC1)
   05165 Human papillomavirus infection
    100471530 (TSC1)
SSDB
Motif
Pfam: Hamartin
Other DBs
NCBI-GeneID: 100471530
NCBI-ProteinID: XP_002924415
Ensembl: ENSAMEG00000004214
LinkDB
Position
7:complement(57133234..57183294)
AA seq 1168 aa
MAQQANLGELLSMLDSPVLSVRDEVTAVFKENLSSDRGPMLVNTLVDYYLETNSQPVLHI
LTTLQEPHDKHLLDKMNDCMGRAASRLPALSLLGHVIRLQPPWKHKLSQAPLLPSLLKCL
KVDTDVIVLTTGVLVLITMLPMIPQSGKQHLHDFFDIFGRLSSWCLKKPGHVTEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLDTFEEVVRPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPAEASYEDGDSVSPQVSARFPHRAADVAASPYVDM
QNSCGSATSTPYSSSRLTLFSTPGQPPQILSPPSTRLLTEPPQATLWSPSMVCGMTTPPT
SPGNVPPDLSHPYSKVFGTTGGKGTPLGTPATSPPPAPLCHSDDYVHISLRQATATPPKK
EEKTDSARPCLHRQHHLPNDRGLEELPGSKGSVPLSDLPGFLGDLDSEEDSIEKAKEEAA
ISKELSEITTAGTGPLVPRGGFDSPFYRDSLPGCPRKNHSAATGAQGASMNPEPLNSSLD
KLGPDTPKQAFTPIDPPCGGANQSPAGSRERQTVLETDILTPSPCKIPPQRGVGFGSGQP
PPYDHLFEVALPKTAHHFVSKKTKELLKKAKGNAEEDCPPSTSPAEVLDRLIQQGADAHS
KELNKLSLPSKSVDWTHFGGSPPSDEIRTLRNQLLLLHNQLLYERFKRQQHALRNRRLLR
RVIRAAALEEHNAAMKDQLKLQEKDIQIWKVSMQKEQARYSQLQEQRDTMVTQLHSQIRQ
LQHDREEFYNQSQELQTKLEDCRNMIAELRLELKKANSKVCHTELLLSQVSQKLSNSESV
QQQMEFLNRQLLVLGEVNELYLEQLQSKHSDTTKEVEMMKAACRKELEKNRSHVLQQNQR
LDTSQKRILELESHLAKKDHLLLEQKKYLEDVKVQARGQLQAAESRYEAQKRITQVFELE
ILDLYGRLEKDGLLKKLEEEKAEAAEAAEERLACCKDGCSDSVTGHNEEASGHNGETKPP
RPGGGVRGGGASRGGGGGSGGGSSELSTPEKPPTQRAGLFSSRWETTVGESATSIPTTVG
SFPSSKSFLGMKARELFRNKSESHCDEDSVTISSLSETLKTELGKDPGAEVKTPLNLDGP
HPSPPNPDSVGQLHIMDYNETHHEHSEG
NT seq 3507 nt   +upstreamnt  +downstreamnt
atggcccagcaagcaaacctcggggagctcctgtccatgctggactcccctgtactgagt
gtgcgcgacgaggtgacggctgtctttaaagagaacctcagctctgaccgtggtccgatg
ctcgtaaacaccctggtggattattacctggaaaccaattctcagccggtattgcacatc
ctgactaccttgcaagagccgcacgacaagcacctcttggacaaaatgaatgactgtatg
ggcagagccgcctctcggctgcctgcgctgtcgctgctggggcatgtcatcaggctgcag
ccgccttggaagcacaaactctctcaagcacctcttttgccttctttactcaaatgtctg
aaggtggacaccgatgtcatcgtcctcacgacaggtgtcttagtgttgataaccatgcta
ccaatgattccacagtcggggaagcagcaccttcatgatttctttgatatttttggccgt
ctttcatcatggtgcctgaagaaaccaggccacgtgacagaaatctatcttgtccatctc
catgccagtgtttatgctctctttcatcgcctctacggaatgtacccttgcaactttgtc
tcctttctacgctctcactacagtatgaaggagaacttggacactttcgaagaagtggtc
aggccaatgatggaacacgtgcgaattcacccggaattagtgactggatccaaggaccac
gaactggaccctcgaaggtggaagcgattagaaacacatgatgttgtaatagagtgtgcc
aaaatctctctggaccccgccgaagcctcctacgaagatggagactccgtgtccccgcag
gtgtcagcgcgctttcctcatcgtgcagccgatgtggccgccagcccttacgtcgacatg
cagaatagctgtgggagtgctacctcgaccccttattccagttctcggctgacattgttc
agtacacccgggcagccacctcagattctgagtcccccatcgacacggctgttgactgag
ccgccacaagctactctttggagcccgtctatggtttgtggtatgaccactccgccaact
tctcctggaaatgtcccacctgatctgtcacacccttacagtaaagtctttggtacaact
ggtggaaaaggaactcctctgggaaccccagcaacgtctcctcctcccgccccgctctgc
cactcagatgactacgtgcacatttccctccggcaggccacagccacaccccccaagaag
gaagagaaaacagattcagcaaggccctgtctacacagacagcaccatctcccgaacgac
agaggattagaagagttacctggcagcaaaggttctgtccctctgagtgaccttccaggg
tttttaggggacctggactccgaagaagatagcattgagaaagctaaagaagaagcggcg
atatctaaagaactctccgagatcacgacagccggcaccgggcccctggttcctcgagga
ggctttgactcccccttctaccgggacagtctcccgggctgccctcgcaagaaccattcg
gccgccactggtgctcagggcgccagtatgaaccctgagcctttgaactcctccctggac
aagcttgggcctgacacaccgaagcaagcctttactcccatagacccgccctgtggaggc
gccaaccagagccctgccgggagcagggagcgccagactgtgctggagaccgacatcctc
actcccagcccttgtaaaattccacctcagaggggagtggggtttggaagtgggcagcct
cccccttacgatcatctttttgaggtggcattgccaaagaccgcccatcattttgtcagc
aagaagaccaaggaactgttaaagaaagcaaaaggaaacgcagaggaagactgtcctccc
tcaacctcccccgcggaagttctggacagactcatccagcagggagcggacgcgcacagc
aaggagctgaacaagttgtccttacccagcaagtctgtcgactggacccactttggaggc
tctcctccctcagatgagatccgcaccctccgtaaccagttgcttttactgcacaaccag
ttgctctatgagcgttttaagaggcagcagcacgcgctccggaacaggcggcttctccgc
agggtgatcagggcggcggccctggaggagcacaacgcggccatgaaagaccagttgaag
ttacaagagaaggacatccagatctggaaggttagcatgcagaaggagcaggcccggtac
agccagctgcaggagcagcgagacacgatggtgacccagctccacagccagatccgccag
ctgcagcacgaccgggaggagttctacaaccagagccaggagctgcagacaaagctagag
gactgcaggaacatgatcgcagagctgcgtctggaattgaagaaggccaacagcaaggtg
tgtcacaccgagctgctgctcagtcaggtgtcccagaagctctcaaacagtgagtcggtc
cagcagcagatggagttcttgaaccggcagctcttggtccttggggaggtcaacgagttg
tatctggaacaacttcagagcaagcactcagacaccacaaaggaggtagagatgatgaaa
gctgcgtgtcggaaagaactagaaaaaaacagaagccacgttctacagcagaatcagagg
ctcgatacctcccagaaacggattttggaactggaatctcacctggccaagaaagaccac
cttcttttggagcagaagaaatatttagaggatgtcaaagtccaggcaagaggacagctg
caggcggcagagagcaggtatgaggctcagaaaaggatcacccaagtgtttgaattggag
atcttagatttatacggcaggctggagaaggatggcctcctgaagaaacttgaggaagaa
aaagcagaagcagccgaagcggcagaagaaaggcttgcctgttgcaaggacggctgctcg
gattctgtaacagggcacaacgaagaggcatctggccacaacggcgagaccaagcccccc
cgacccggcggtggcgtgcggggtggcggtgcgagtagagggggtggcggtggcagcggt
ggcggcagcagcgagctttcgaccccggagaagccccccacccagagggcaggcctgttc
agcagtcggtgggaaactaccgtgggagagtcggccaccagcatccccacgactgttggc
tcctttcccagttcaaaaagcttcctaggcatgaaggcgcgagagttatttcgtaataag
agtgagagccattgtgacgaggacagtgtgaccatcagtagcctttctgagacgctaaag
acagaactgggcaaagacccaggtgcggaagtcaagacccccctgaacctcgacggcccg
cacccctcccccccgaaccccgacagtgttggacagctgcacatcatggactacaatgag
actcatcatgagcacagcgaaggatga

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