Ailuropoda melanoleuca (giant panda): 100471573
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Entry
100471573 CDS
T01329
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100471573 (SBNO1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100471573 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100471573
NCBI-ProteinID:
XP_002913142
Ensembl:
ENSAMEG00000015151
UniProt:
A0A7N5JI57
LinkDB
All DBs
Position
12:5884555..5940922
Genome browser
AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDGGLATPTHTPSVQQSMPLSALELGLETEAA
VPVKPEPETVPTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSVSAPAVRNAVTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKVKKRKGEEITREAKKAR
KVGGLTGSSSDDSGSESDVSDHEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIR
KDHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSTPVILPAPNSAPANSNTNSNNS
LITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSD
DALIHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQ
QRHPQSIANLSNA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttactgcttgctgctttgagtgagagtggaattagtccg
aatgacctctttgatattgatgggggagatggagggcttgcaactccaacacatactcct
tcagttcaacagtccatgccacttagtgcattagaactaggtttggagactgaagcagca
gttcctgttaaaccagaaccagagacagtacctactccagccctactaaatgttaggcaa
cagcctccatctactacaacatttgtgctgaatcaaataaatcagcttccaaccctggga
tctacaattgtaatgactaaaacaccgcctgtaacaacgaataggcagaccatcacttta
acaaaatttatccagactactgcaaacacacgcccttcagtctcagcaccagcagtacga
aatgccgtgacctctgcaccctcaaaagaccaggttcagctgaaggatctactaaaaaat
aatagtctgaatgaactcatgaaactgaagccaccagctaatattgctcagccagttgca
acagcagctactgatgtaagcaatggtacagtaaagaaagagtcttctaataaagaagta
gcaagaatatggataaacgacatgaaaatgaggagtttttctccaaccatgaaggtccct
gttgtgaaagaggaagatgaaccagaggaagaagatgaagaagaaatgggtcatgcagaa
acctatgcagagtatatgccgataaaattaaaaattggtctacgtcatccagatgctgta
gtggaaactagttctttatccagtgttactcctcctgatgtttggtacaaaacatctatt
tctgaagaaaccattgataatggctggttatcagcattacagcttgaggcaattacttat
gcagcccagcaacatgaaacattcctacctaatggagatcgtgctggcttcttaataggt
gatggtgctggtgtaggaaaaggaaggacaatagcgggaattatctatgaaaattacttg
ttgagtagaaaaagagcattatggttcagtgtttcaaatgatctaaagtatgatgctgaa
agagatttgagggatattggagcaaaaaacattttggttcattcattaaacaagtttaaa
tacggaaaaatttcttccaaacataatgggagcgtgaaaaagggtgttatttttgctacc
tattcttcccttattggtgaaagtcagtctggcggtaaatataaaactagattaaaacaa
cttctgcattggtgcggtgatgacttcgatggagtgatagtgtttgatgaatgtcataaa
gcaaaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttagcagttcta
gagcttcagaacaaattgccaaaggccagagttgtttatgctagtgccactggtgcttct
gaaccacgaaacatggcctatatgaaccgtcttggaatatggggtgagggaactccattt
agagaattcagtgattttatccaagcagttgaacggagaggtgttggtgccatggaaata
gttgctatggatatgaagcttagaggaatgtacattgctcgacagctgagctttactgga
gtgaccttcaaaattgaggaagttcttctttctcagagctatgtgaaaatgtataacaaa
gcagtcaagctgtgggtcatcgccagagaacgatttcagcaagccgcagatctgattgac
gctgagcaacgcatgaagaaatccatgtggggtcagttctggtctgcgcaccagagattt
ttcaaatacttgtgcatagcttccaaagttaaaagggttgtgcagctagctcgagaagaa
atcaagaatggaaaatgtgttgtaattggtctgcaatcaacaggagaagctagaacatta
gaagccttggaagagggtggaggagaattaaatgatttcgtttcaactgccaaaggagtg
ttgcagtcccttattgaaaaacacttccctgctccagaccggaaaaaactttatagtttg
ctaggaattgatttgacagctccaagtaacaatagttcaccaagagatagtccttgtaaa
gaaaataaagtaaagaagcggaaaggtgaagaaataactcgagaagccaaaaaagcacga
aaagtaggtggccttactggtagcagttccgatgatagtggaagtgaatcggacgtgtct
gatcatgaagaaagtgactatgagagctctaaaaacatgagttctggagatgatgatgat
ttcaacccattcagagatgagtctagtgaggatgatgaagatgatccctggttaatcaga
aaagatcacaagaaaaacaaagataaaaaaaaaaagaaaagtatagatccagattctatt
caaagtgccttattagcatcaggtcttggatcaaaacgacctagtttttcatctacacca
gtaattttgcctgctcctaacagtgcaccagctaacagtaacaccaacagtaacaatagc
cttataacaagtcaggatgctgtggaaagggcccagcagatgaagaaagacctacttgat
aaactagagaaattagctgaagacctccctcctaataccctggatgaacttattgatgaa
cttggtggccctgagaatgttgctgagatgactggtcgcaaagggagggttgtaagtaat
gatgatggaagcatatcttacgagtcaagatctgaacttgatgttcctgtggaaatacta
aatatcacagaaaaacaaagatttatggatggagataagaatattgctattatctcagaa
gctgccagctcgggtatttcattacaagcagatcggagagctaaaaatcaaaggcgaaga
gttcatatgactttggaattaccctggagtgctgatagagcaattcagcagtttggacga
actcatagatcaaaccaagttactgctcccgagtatgtgtttctgatttctgaattggca
ggggaacaaagatttgcttctattgttgctaaaagacttgagagcttgggagcacttaca
catggtgacagaagagcaacagaatctagagacctgagcaggttcaattttgataataag
tatggaagaaatgctttagaaattgtgatgaaatccatcgtcaacctagattcgcctatg
gtatcaccacctccagactaccctggagaattctttaaagatgttcgacaaggactgata
ggtgttggcctgataaatgtagaagatcgttcgggaattcttactctagataaagattat
aacaacataggaaaattcttaaatagaattttgggtatggaagtgcatcagcagaatgcg
ttatttcagtattttgcagacacacttacagcagttgttcaaaatgccaaaaaaaatgga
agatacgatatgggcattttagatcttggttctggagatgaaaaagtgaggaaaagtgat
gttaagaagtttttgactccaggatattccacctctggtcatgtcgagttatacactatt
agcgtggagaggggaatgtcttgggaggaagccaccaagatttgggctgagctgacagga
ccagatgatggcttttacttgtcattgcaaataaggaacaacaagaaaactgccatctta
gttaaagaagtgaaccctaaaaagaagcttttcttagtttatagaccaaatactgggaaa
cagctcaaattagaaatttatgctgatctaaaaaagaaatataagaaggtagtctcagat
gatgccctgatccactggttagatcagtataattcatctgcagatacttgtactcacgct
tattggcgtggcaactgcaaaaaagccagcttgggattagtttgtgaaataggtcttcgt
tgccgcacatattacgtattatgtggctccgttctgagtgtctggacaaaagttgagggt
gttctagcatccgtcagtggcacaaatgtgaagatgcagatagttcggctaagaacagag
gatggacaacggattgtaggtttgatcattcctgcaaattgtgtgtctcctcttgtaaat
ctcctgtcaacttcagaccagtctcaacagcttgcggtccaacagaaacagctctggcag
cagcgtcacccgcagagcatcgccaacttgagcaacgcataa
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