KEGG   Ailuropoda melanoleuca (giant panda): 100471584
Entry
100471584         CDS       T01329                                 
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03015  mRNA surveillance pathway
aml05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100471584 (HBS1L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    100471584 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100471584 (HBS1L)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100471584 (HBS1L)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 AAA_29 DO-GTPase2
Other DBs
NCBI-GeneID: 100471584
NCBI-ProteinID: XP_002915121
Ensembl: ENSAMEG00000009749
UniProt: G1LTA8
LinkDB
Position
10:complement(81224191..81306089)
AA seq 685 aa
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSLVEPVEEYDYE
DLKESSSSLLNHQLSGIDQARLYSCLDHMREVLGDAVPDDTLIEAVLKNKFDVQKALAVV
LEQDKMQNWKVKSERAISTGKIAKGKSVDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTPQKGHLSEGTSIAASDVPDTVSKSLLPSHTIQTSEEQSSTPTPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKP
PQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCVFCGPKEPIKACTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTRGQNALVELQTQRPVALELYKDF
KELGRFMLRYGGATIAAGVVTEIKE
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtggaggatgattactgtatttcaccatcaacagctgctcagttt
atttactcgcggcgcgacaaaccttcacttgttgagcctgtagaagaatacgattatgaa
gatctgaaagagtcctccagttctcttttgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
actttgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttggcagtggtt
ctggaacaagataaaatgcagaattggaaggtcaagagtgagagagcaatatctacaggg
aagatagcaaaaggaaaatcagtagactcccagtcatctcgaagtgaatctgaaattgtg
cccaaagttgctaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaaccgaagaaaatggtcatagtttccacacacctcaaaaaggacatcttagtgaa
ggaaccagcattgctgcttctgatgttcctgacactgtttctaaatcacttcttccatcc
cacaccattcaaacatcagaagagcagagttcaacaccaacgccggtgaaaaagtctggc
aagctgaggcagcaaatagatgtcaaagcggaactggagaagcggcaaggagggaagcag
ctcctcaacttggtggtcatcggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccacaaccaaagtt
attacattaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcagatgtagccattttagttgtagacgccagcaggggagagtttgaagctgga
tttgagactgggggacagacacgagaacatggcctcttggttcgttctcttggagtcaca
cagcttgctgttgcggtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaagcttgggcactttcttaagcaagcaggttttaaggaaagtgatgta
gcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcaatcaagt
gaactcacaaaatggtataaaggactgtgtttattagaacaaattgattccttcaagcct
cctcagaggtctgttgataagccttttagattatgtgtgtctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgatgaa
cccgtcgactgggctgcagcaggtgatcatgttagtcttacgttggtggggatggatatc
atcaagatcaacgttggctgcgtattttgtggccccaaagaacccattaaagcttgcact
cgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggatttcct
gtgctgttacactaccagactgtcagtgaacctgccgttattaaacgactgattagcgtc
ttaaacaagagcacaggtgaagtcacaaagaagaagccaaaactgctgactagaggccag
aacgccctggtggagctgcagacgcaacggccggtcgcgctggagctgtacaaagacttc
aaagagctgggccggttcatgctgcgctatggcggcgccacgatcgccgccggcgtggtc
accgagataaaggaatga

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