Ailuropoda melanoleuca (giant panda): 100471735
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Entry
100471735 CDS
T01329
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml01524
Platinum drug resistance
aml03430
Mismatch repair
aml05200
Pathways in cancer
aml05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100471735 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100471735 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
100471735 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100471735 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aml03400
]
100471735 (MSH2)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100471735 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
100471735
NCBI-ProteinID:
XP_002912468
Ensembl:
ENSAMEG00000006254
UniProt:
D2GUB5
LinkDB
All DBs
Position
4:73351035..73424104
Genome browser
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGSKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGEAAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEPVNSAVLPEMENQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQSLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGESQGYDDMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaaaccgaccactacggtgcgcctgttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgcccgagaagtgttcaagacg
cagggggtagtcaagtacatagggccggcaggaacaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgacagtatagagtt
gaagtttataagaatagagctggaagtaaggcctcaaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctgtttggtaacaatgat
atgtcagcttccattggtgtcgtgggtgttaaaatgtctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagaggaagctaggactttgtgagttcccggat
aatgatcagttctccaatttggaggctctcttgatacagattggaccaaaggaatgtgtt
ttaccaggaggagaggctgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagccggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcgtcactgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactgactacttttgacttcagtcagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagactg
aatttagtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaat
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttattcaagct
ctggaaaagtatgaaggaaaacaccagagtttattgttggcagtttttgtcactcctctt
attgatcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcccaatctgagtgaa
ttaagagaaataatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagca
agagatctaggtttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattactttcgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acggtggacattcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaaccgagtacgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctacgtagaaccaatgcagacgctcaatgacgtgttagct
cagctggacgctgttgtcagctttgctcacgtgtccaatgcagcacctgttccatatgtg
cgaccggtcattttggagaaaggacaaggaagaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcttttatccctaatgatgttcacttcgaaaaggat
aaacagatgttccacatcattactggccccaatatgggaggtaaatccacatatattcgc
caaactggggtgatagttctcatggcccagattgggtgttttgtgccatgtgagtcagcg
gaagtgtccattgtggactgcatcttggcccgtgtaggggctggtgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttgataatcatagatgagttgggaagaggaacctctacctatgatggattt
gggttagcgtgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgtcgcagagcttgccaatttccctaggcatgta
atagagtgtgcgagacaaaaggctctggagctagaggagtttcagaatattggagaatca
caaggatatgatgacatggagccagccgcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaatgaagttaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
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