Ailuropoda melanoleuca (giant panda): 100471907
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Entry
100471907 CDS
T01329
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100471907 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100471907 (BARD1)
04121 Ubiquitin system [BR:
aml04121
]
100471907 (BARD1)
03036 Chromosome and associated proteins [BR:
aml03036
]
100471907 (BARD1)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100471907 (BARD1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100471907 (BARD1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100471907 (BARD1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100471907 (BARD1)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100471907 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Siva
Motif
Other DBs
NCBI-GeneID:
100471907
NCBI-ProteinID:
XP_034511014
Ensembl:
ENSAMEG00000003804
LinkDB
All DBs
Position
2:complement(177378120..177462958)
Genome browser
AA seq
774 aa
AA seq
DB search
MPGNRQPRVRSGNEPRPASTMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHGDKLSDLKE
DASRENLFNDAESKKNSIKMWFSPRSKKVRYVVSKLSVQTQPQEINDENARQASMYEFVS
TSPPTSVSERAKKASARSGKKQKKKTLTEINQEWNLEADKEDGELDSKEEFKEKLVSFCS
QPSVIGGPQTNGEIDLLASGSVTESQCFSSFAEFSLPLAEQTESPETEGRNEDVTPQKNV
CGNPLPPEQSLPSGPNGRRGRRSRRSSPVAKRCRSSLPGTSRQHIVLSENKPLPGRSSPP
SGKLKVGDTLRRKSSNVSDESLSLSPGTPPSALNSPSYRRMMSSPAATKLSPSSLMAVKR
NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHVKVVELLLQHK
ALVNTTGYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLL
LPEKNESSSTRHCSVQTSTGPRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNT
VTHVIVPGDTAQSTLKCMLGILSGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLN
KEQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYH
ARPDSDQRFCTQYIIYEDLSNRRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgagggtccgctccgggaacgagcctcgtcccgcgtccacc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcacgttgtactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttatactccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatggcgataagctttcagatttgaaagaa
gatgcatctagggaaaatttatttaatgatgcagaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgagtaaactttcagtgcaaact
cagcctcaagagataaatgatgagaatgctcggcaggcttccatgtacgaatttgtttct
acaagtcctccaacaagtgtttctgagagggctaaaaaggcttctgcaagatctggaaaa
aaacaaaaaaagaaaactttaactgaaatcaaccaagaatggaacttagaggcagataaa
gaagatggtgaacttgactccaaagaggaatttaaggaaaagctggtgtctttctgtagc
caaccgtctgttattggtggtcctcagacaaatggtgaaatagacttactagcaagtggt
tctgtcacggaatcacagtgttttagcagcttcgctgaattctctttaccattagctgag
caaacagagtctccagaaacggagggcaggaatgaagacgtgactccccagaagaatgtc
tgtgggaatcctcttccacctgagcagtccttgccatcaggtcccaatgggcgacgtggg
cgtcgcagcagacggtccagtcccgttgctaagaggtgcagaagcagccttcctggcacc
agtaggcagcacatagtgctttcagaaaacaaaccgttgcctggccgctcctcaccaccc
tcaggcaaactcaaagttggtgacacattaaggagaaaaagcagtaatgtatcagacgag
tccctgagcctctcaccaggtacaccgccttctgcgctgaacagcccgagttacagacgg
atgatgtctagccccgcagccacgaagctgtcacccagtagccttatggctgtgaaaaga
aatcatagaggagagactctgcttcatattgcttcaattaagggcgacataccttctgtt
gagtacctcttacaaaatggaagtgacccaaatgttaaagaccatgctggatggacacca
ttgcatgaagcctgcaatcacgggcatgtgaaggtggtggagttgttgctgcagcacaag
gcgttggtgaacaccactggctatcagaacgactcgccgcttcatgatgccgccaagaat
gggcacttggatatagtcaagctcttactttcctacggagcctccaggaacgccgttaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaaatcactgttgctg
ctaccagagaagaatgaatcatcatcaactcgccattgctcagtacagacgagcactggt
ccgcgtagggatggacctcttgtgcttataggcagtgggctttcttcagaacaacaaaaa
atgctcagtgagctggcagcaattcttaaggctaaaaaatgtgccgaatttgacaataca
gtaactcatgtcattgttcctggggatacagctcaaagtaccctaaaatgtatgcttggg
attctcagtggatgttggatcttaaaatttgaatgggtgaaagcatgtctacagagaaaa
gcatgtgaacaggaggaaaaatacgagattcctgaaggaccacagcgaagcaggctcaac
aaggaacagctgttgccaaagctgtttgatgggtgctacttctattttgggggaaccttc
aaacaccatccaaaggacaaccttattaagcttgtcgctgcagctgggggccaggtcctc
agtagaaagcccaagccagacagtgacgtgactcagaccatcaatacggtcgcgtaccac
gcaagacccgattccgatcagcgcttctgcacacagtatatcatctacgaagatttgtct
aatcgtcgcccagagagggttcggcagggcaaagtctggatggctccttccagctggttt
atcgattgtgtgatgtcctttgagttgctccctcttgacagctga
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integrated database retrieval system