KEGG   Ailuropoda melanoleuca (giant panda): 100472062
Entry
100472062         CDS       T01329                                 
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:aml04990]
    100472062 (WDR1)
Domain-containing proteins not elsewhere classified [BR:aml04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   100472062 (WDR1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th PEP5_VPS11_N eIF2A Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_RIG_1st NBCH_WD40 Ge1_WD40 WD_LRWD1 RMC1_N WDR54 PROPPIN WD40_like Beta-prop_DCAF12 WD40_RFWD3 PQQ Beta-prop_NWD2_C Beta-prop_ELP1_1st Beta-prop_IP5PC_F Beta-prop_WDR11_1st BBS2_Mid HCV_capsid
Other DBs
NCBI-GeneID: 100472062
NCBI-ProteinID: XP_034516065
Ensembl: ENSAMEG00000005656
LinkDB
Position
5:complement(25587444..25631132)
AA seq 664 aa
MVKAGGEPRAGPRFRVRRVRSGSAQGQPLPVEATGDRLRPSSARPGAEQGAATNAPRLVC
VSAEKVFASLPQVERGVSKIIGGDPKGNNFIYTNGKCVILRNIDNPALADIYTEHAHQVV
VAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGE
GREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFK
FTIGDHGRFVNCVRFSPDGNRFATASADGQIYVYDGKTGEKVCALGGGKAHDGGIYAISW
SPDSTHLLSASGDKTSKIWDVNVNSVVSTFTMGSTVLDQQLGCLWQKDHLLSISLSGYIN
YLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFAGK
GHTNQVSRMTVDESGQLVSCSMDDTVRYTNLTLRDYSGQGVVKMDVQPKCVAVGPGGYAV
VVCIGQIVLLKDQKKCFSVDSPGYEPEVVAVHPSGDTVAVGGTDGNVRLYSILGTTLKDE
GKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHHAKIVCLAWSP
DNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDERTLVTTSHDASVKEW
TITY
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggtcaaagctgggggcgagccgcgcgcggggccgcgcttccgggttcggcgcgtccgc
agcggcagcgcgcagggncagcccctcccggtggaggcaacaggtgaccggctgagaccg
tcctcagcccggccgggggccgagcagggggctgccactaacgcgcctcgcttggtttgt
gtctccgcagagaaggtgttcgccagcctcccccaggtggagaggggcgtctccaaaatc
atcggcggcgaccccaagggcaacaattttatttacaccaatggaaagtgcgtcattcta
aggaacatcgacaacccagcccttgctgacatctacacggagcatgcccatcaggtggtg
gtggccaagtacgcgcccagcgggttctacatcgcctctggagatgtatctggaaagctc
aggatctgggataccacgcagaaggagcacctcttaaagtatgagtatcagcctttcgct
gggaagatcaaggacattgcttggacagaagacagtaagaggatcgcagtggtcggggaa
ggaagggagaagtttggagccgtctttctgtgggacagtggctcttccgtgggcgagatc
acgggacacaacaaagtcatcaacagcgtggacatcaagcagagccgaccgtaccggctg
gccacaggcagtgacgataactgtgccgcgttctttgaggggccaccgttcaagttcaag
tttacaattggcgaccatggccgctttgtcaactgtgtgcgattctctcctgatgggaac
agatttgccactgccagcgcggatggccagatctatgtctacgatggaaagacgggagag
aaagtgtgtgccctgggaggaggcaaggctcacgacggaggcatttacgctatcagttgg
agccctgatagcacccatttgctctctgcttccggagacaaaacctcgaagatttgggac
gtcaatgtgaactctgtcgtcagtacgtttacaatgggctccaccgttctggaccagcag
ctgggctgcttgtggcagaaggaccacctcctcagcatctccctgtctgggtacatcaat
tacctggacaaaaacaaccccagcaagcccctgcgggtcatcaagggtcacagcaaatcc
atccagtgtctgacggtgcataaaaacggcggcaagtcctacatctactccgggagccac
gatggacacattaattactgggattcagagacgggggagaatgactccttcgccgggaag
ggccacacgaaccaggtgtccaggatgacggtggacgaatcggggcagctggtgagctgc
agcatggacgacacggtgcggtacaccaacctcacgctgcgggactacagcgggcaggga
gtcgtgaagatggacgtccaacccaagtgcgtggctgtgggccccggaggctacgctgta
gtcgtgtgcatcggccagatcgtcctgcttaaggatcagaagaagtgcttcagcgtcgac
agccccggctacgagcccgaagtggtggcggtgcaccccagcggtgacacggtggctgtc
gggggcacggacgggaatgtccgcttgtactccattctaggcaccacgctgaaggacgag
ggcaagctcctggaggccaagggccctgtgaccgatgtcgcatattcccacgatggcgcc
ttccttgccgtgtgcgatgccagcaaagtggtcacggtcttcagtgttgctgacggctac
tcggagaacaacgtattttacggacaccacgcgaagatcgtctgcctggcctggtcacca
gacaacgagcacttcgcctccggcggcatggacatgatggtgtacgtctggaccctgagt
gaccccgagaccagggtcaagatccaagatgcacaccggctccaccacgtcagcagcctg
gcctggctggacgagcgcacgctggtcaccacctcccacgacgcctctgtcaaagagtgg
acaatcacctactga

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