Ailuropoda melanoleuca (giant panda): 100472114
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Entry
100472114 CDS
T01329
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X4
KO
K08331
autophagy-related protein 13
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04136
Autophagy - other
aml04140
Autophagy - animal
aml04211
Longevity regulating pathway
aml05010
Alzheimer disease
aml05014
Amyotrophic lateral sclerosis
aml05016
Huntington disease
aml05017
Spinocerebellar ataxia
aml05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100472114 (ATG13)
04136 Autophagy - other
100472114 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100472114 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100472114 (ATG13)
05014 Amyotrophic lateral sclerosis
100472114 (ATG13)
05016 Huntington disease
100472114 (ATG13)
05017 Spinocerebellar ataxia
100472114 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
100472114 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100472114 (ATG13)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100472114 (ATG13)
Membrane trafficking [BR:
aml04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100472114 (ATG13)
Atg1 complex
100472114 (ATG13)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100472114 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100472114
NCBI-ProteinID:
XP_011226233
Ensembl:
ENSAMEG00000006798
UniProt:
A0A7N5JE60
LinkDB
All DBs
Position
16:74855057..74907777
Genome browser
AA seq
481 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TTYPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPNQPAHGAQADQERLATYTPSDG
AHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAM
FSPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKD
DILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETL
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcacaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggcgagaagatttgtactcgt
tcatcttcatcccccacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaaaaaagcactggcaggacagttgcctgctgtcgggagatcgatg
tgtgtggagatctcactcaagacttctgagggtgattccatggagttagaaatttggtgt
ctcgaaatgaatgaaaagtgtgataaagagattaaagtttcctacaccgtgtacaacaga
ctgtcattgctgctgaagtccctccttgccataactagggtgacaccagcttacagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctat
cccagctcctcacccatgcacccctgcaattacagaactgctggtgaggacactggagta
acaacatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcc
cctccatctcagctcatggttcctgggaaggaaggtggggtaccccttgctcccaaccag
cctgcccacggtgcccaggctgaccaggagagactggcaacctacaccccgtctgacggg
gcccactgtgctgccacaccttccagcagcgaggatactgaaacagtatcaaacagcagt
gagggccgggcatccccccacgatgtcttggaaaccatcttcgtccgcaaagtgggggct
tttgtcaacaagcccatcaaccaggtgaccctgaccagtttggacataccctttgccatg
ttctctcccaagaatttggagctggaggatgccgatcccatggtgaatcctccagactcc
ccagagactgaatctcctctccagggcagcctgcactcggatggctccagtgggggcagc
agtggcaatacccacgatgactttgtcatgattgactttaaaccggctttttctaaagac
gacattcttccaatggacctggggaccttctatcgtgaatttcagaatccccctcagctg
agcagcctctccatagatatcggggcacagtccatggctgaggacttggattcactacca
gagaagctggctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaaccctg
cagtaa
DBGET
integrated database retrieval system
