Ailuropoda melanoleuca (giant panda): 100472130
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Entry
100472130 CDS
T01329
Symbol
BRPF1
Name
(RefSeq) peregrin isoform X5
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100472130 (BRPF1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
100472130 (BRPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
100472130
NCBI-ProteinID:
XP_002925080
Ensembl:
ENSAMEG00000016299
UniProt:
D2HRB1
LinkDB
All DBs
Position
4:49635837..49651341
Genome browser
AA seq
1220 aa
AA seq
DB search
MGVDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHDNPPPPQQTPLRK
HKKKGRQSRPANKQSPSPSEVSQSPGREVMSYAQAQRMVEVDLHGRVHRISIFDNLDVVS
EDEEAPEEAPENGSNKENTETPAATPKSGKHKNKEKRKDSNHHHHHNASVSTAPKLPEVV
YRELEQDTPDAPPRPTSYYRYIEKSAEELDEEVEYDMDEEDYIWLDIMNERRKTEGVSPI
PQEIFEYLMDRLEKESYFESHNKGDPNALVDEDAVCCICNDGECQNSNVILFCDMCNLAV
HQECYGVPYIPEGQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEV
CFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLY
MKMEPVRETGANGTSFSVRKTAYCDIHTPPGSARRLPALSHSEGEEEEEEEEDEGKSWSS
EKVKKAKAKSRIKMKKARKILAEKRAAAPVVSVPCIPPHRLSKITNRLTIQRKSQFMQRL
HSYWTLKRQSRNGVPLLRRLQTHLQSQRNCDQVGRDSEDKNWALKEQLKSWQRLRHDLER
ARLLVELIRKREKLKRETIKVQQIAMEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLS
EVTELDEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIF
YRAAVRLREQGGAVLRQARRQAEKMGIDFETGMHIPHSLAGDEAPQHTEDAAEEERLVLL
ENQKHLPVEEQLKLLLERLDEVNASKQSVGRSRRAKMIKKEMTALRRKLAHQRETGRDGP
ERHGPTSRGSLTPHPAACDKDGQTDSAAEESSSQETSKGLGPNMSSTPAHEVGRRTSVLF
SKKNPKTAGPPKRPGRPPKNRESQMTPSHGGSPVGPPQLPIMGSLRQRKRGRSPRPSSSS
DSDSDKSTEDPPMDLPANGFSGGNQPVKKSFLVYRNDCSLPRSSSDSESSSSSSSSAASD
RTSTTPSKQGRGKPSFSRSTFPEDSSEDTSGTENEAYSVGTGRGVGHSMVRKSLGRGAGW
LSEDEDSPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQM
TQEAREHLYLVLFFDNKRTWQWLPRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHR
ALQHRSKVQGEQSSETSDSD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggactttgatgtgaagactttctgccacaacttgcgggcaactaagccaccg
tatgagtgccctgtggagacctgccgcaaggtctacaagagttacagtggtattgagtac
catctatatcactatgaccacgacaacccaccgcccccgcagcagactccactccgcaag
cacaagaagaaggggcgccaatcacgcccagccaacaagcagtcgcccagcccctcagag
gtatcccagtcaccgggccgtgaggtgatgagctacgcacaggcccagcgcatggtggag
gtggacctgcacggccgtgtccaccgcatcagcatttttgacaacctggatgtggtgtca
gaggatgaggaggcccctgaggaggctcctgagaatggcagcaacaaggagaacactgaa
acaccagctgctactcccaagtcaggcaagcataagaataaggagaagcgcaaggactcc
aaccatcaccatcaccataatgcttctgtgagcaccgctcccaagctaccagaggtggta
taccgagagttggagcaggacacccctgatgccccaccccggccaacttcctattaccgg
tacattgagaagtccgcagaggagctggacgaggaagtagagtatgacatggacgaagag
gactacatctggttggatatcatgaacgagcggcggaagacagagggtgtgagtcccatc
ccacaggagatctttgagtacttaatggaccgtctggagaaggagtcctactttgaaagc
cacaataaaggtgaccccaatgcactagtggacgaggatgccgtgtgctgtatctgtaat
gatggtgagtgccagaacagcaatgtcatcctgttctgtgacatgtgcaacctggctgtg
caccaagagtgctacggtgtcccctacatccctgagggccagtggctgtgccgccgctgc
ctacagtcaccctcccgcgctgtggattgtgccctgtgtcccaacaagggtggtgccttc
aagcagacagatgacgggcgctgggcccatgtggtgtgtgccctgtggatccctgaagtc
tgcttcgccaacacagtcttcctggagcctatcgacagcattgagcacatcccgccagct
cgctggaagctgacctgctatatttgcaaacagcggggctcaggggcctgcatccagtgc
cacaaggccaactgctacacagccttccacgtgacatgtgcccagcaggctggcctttac
atgaagatggagcctgtgcgggagacaggtgccaacggcacctctttcagtgtccgcaag
acagcctactgtgacatccacacacccccaggttcggcacgccgcttgcctgcgctatcc
cacagtgagggcgaggaggaggaggaggaggaggaggatgagggcaagagttggagctca
gagaaggtcaagaaggcaaaggccaagtcccggatcaagatgaagaaggcacggaagatc
ctggcagagaagcgagcagcagctcctgtggtgtcggtgccttgcatcccaccacacagg
ctcagtaaaatcaccaaccgcctgaccatccaaaggaagagccagttcatgcagaggtta
cacagctactggacgctgaaacggcagtcccgaaatggagtcccattgctacgtcgccta
cagacacacctgcagtctcagaggaattgtgaccaagtcgggagagattctgaggataag
aactgggccctcaaagaacagctgaagtcctggcaacggctccggcacgacctagaacga
gctcggctgctggtggagcttatccgcaagcgggagaaactcaaaagggagacgatcaag
gtccagcagatcgccatggagatgcagctgacccctttccttatcctccttcgcaaaacc
ttggagcagctccaagaaaaggacacaggcaacatcttcagcgagccggtccctctgtct
gaggtaaccgaattggacgaagtacctgactacctagaccacatcaaaaagcccatggac
tttttcaccatgaagcagaacttggaggcttaccgctacctgaactttgatgattttgag
gaggacttcaaccttatcgtcagcaactgcctcaagtataacgccaaggataccatcttc
taccgggcagcagtgcggctccgtgaacagggtggcgctgtgctccgccaggcccggcgc
caggcagaaaaaatgggcattgactttgagacgggcatgcatatcccccacagtctggct
ggagacgaagccccacaacacactgaagatgcagcagaggaagaacggctggtcctgctg
gagaaccagaaacatctgccagtggaagagcagctaaagttgttgctggagcggctggat
gaggtgaatgccagcaagcagagtgtgggccgttcacggcgtgcaaagatgatcaagaaa
gagatgacggcactgcggcgaaagcttgcccaccagcgggaaactggaagggatgggcct
gagcggcacggccccacgagccggggcagcctgacacctcacccggcagcctgtgacaag
gatgggcagacagacagtgccgccgaggagagcagcagccaggagacaagcaaaggcctg
ggtcccaacatgtcctcaacccccgcacatgaggtgggcaggagaacctcagttctgttc
tccaaaaagaacccgaagacggctggaccgcccaagaggccgggccggccccccaaaaac
cgggagagccagatgacccccagccacggaggcagtcctgtggggcccccccagctcccc
atcatgggctccctacgtcagcgcaagcggggtaggagcccccggcccagttcgagctca
gacagcgacagtgataaatccacagaagaccccccaatggacttaccagcaaatggcttc
agcggtggaaatcagccagtgaagaagagtttcttggtatatcgtaatgactgcagcctt
ccccggagcagctccgactctgagtccagcagcagtagcagcagcagcgctgcctcagac
cgaaccagcacaacaccctcaaaacaaggccggggcaagccctccttctctcggagcacg
ttcccagaagatagcagtgaagatacctcaggcactgagaacgaggcctactccgtgggc
actggccgcggcgtgggccacagcatggtaaggaagagtctaggacggggagctggctgg
ctgtcagaggatgaggactcgcccttggatgctctggacctggtgtgggccaaatgccga
gggtatccgtcatacccagctctgataattgatccaaagatgccccgggaaggtatgttc
caccatggggttcctatccctgtgcccccactggaggtgctgaaacttggggagcagatg
acccaggaagcccgagagcatctctacctcgtcctcttctttgacaacaagcgaacctgg
cagtggctgccgagaactaagctggttcctctgggcgtgaaccaggaccttgacaaggaa
aagatgctggagggccgcaaatccaacatccgcaagtcagtgcaaattgcctaccacagg
gctttgcagcaccgcagcaaggtgcagggcgagcagagcagcgagaccagtgatagtgac
tga
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