Ailuropoda melanoleuca (giant panda): 100472181
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Entry
100472181 CDS
T01329
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X2
KO
K08534
RAR-related orphan receptor gamma
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04659
Th17 cell differentiation
aml04710
Circadian rhythm
aml05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100472181 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
100472181 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100472181 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100472181 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100472181 (RORC)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100472181 (RORC)
Nuclear receptors [BR:
aml03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100472181 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100472181
NCBI-ProteinID:
XP_011223395
Ensembl:
ENSAMEG00000000363
UniProt:
G1L0N1
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All DBs
Position
2
Genome browser
AA seq
518 aa
AA seq
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MDRAPQRQHRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CHVVYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQRQQQQQRGQVAKTPPAGGQGADPLACPVGLPDGQLPLGSSPDLPEAAACPPGLLRAP
GSGSSYPSSLAKSGPDGASFHMEYSPERGKAEASEGFYSTGSQLSRDRCGLRFEDAGHPG
LEEPGRGPDGYCSPSFHSAPEAPYASVTETEHLVQNVCKSYRETCQLRLEDLLRQRPNIF
SREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSRSLSSLRFSEDEIALY
TALVLINANRPGLQEKRKVEQLQHNLELAFHHHLYKTHRQGILAKLPPKGKLRSLCSQHV
EKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacagcaccgagcctcgcaggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgattccttgcaaaatctgtggggacaagtcatctggg
atccactacggggttatcacctgtgaggggtgcaagggtttcttccgccggagccagcag
tgtcacgtggtctactcctgcacccgccagcagaactgccccatcgaccgtaccagccgg
aaccggtgccagcactgtcgcctgcagaaatgcctggccctgggcatgtcccgagacgct
gtcaagttcggccgcatgtccaagaagcagagggacagcctgcatgccgaggtgcagaaa
cagctgcagcggcagcaacagcagcagcggggacaggtggccaagaccccgccagcgggg
ggccagggagccgaccccctcgcctgccccgtagggctcccggatgggcagctgcccctg
ggctcctcgcctgacctgcctgaggccgcggcctgcccccctggcctcctgagagcccca
ggctccgggtcctcctacccgagcagcttggccaagtctgggcccgacggggcctcattt
cacatggaatacagccccgagaggggcaaggctgaggccagtgagggtttctacagcaca
ggcagccagctgagccgtgatagatgtggacttcgttttgaggacgccgggcatcctggg
ctcgaggaaccaggacggggcccggacggctactgcagccccagtttccacagtgccccg
gaggcgccctatgcctccgtgacggagactgagcacctggtgcagaacgtttgtaagtcc
taccgagagacgtgtcagctgcggctggaggacctgctccggcagcgccctaacatcttc
tcccgggaggaggtggccggctaccagaggaagtccatgtgggagatgtgggaacgctgc
gcccaccgcctcaccgaggccattcagtacgtggtggagttcgctaagaggctctcaggc
tttatggagctctgccagaatgaccagattgtgcttctcaaagcaggagcaatggaagtg
gtgctggtgaggatgtgccgggcctacaacgctgacaaccacacggtctttttcgaaggc
aaatacggtggcatggagctgtttcgagccttgggctgcagtgagctcatcagttccatc
ttcgacttctcccgctccctgagctccttgcgcttttctgaggacgagattgctctctac
acagcccttgtgctcatcaatgccaaccggccagggctccaagagaagaggaaagtcgag
cagctgcagcacaacctggagctggcttttcatcaccatctctacaagactcaccgccaa
ggcatcctggcaaagctgccacccaaggggaagcttcggagcctgtgcagccagcatgtg
gaaaagctgcaaaccttccagcatctccaccccatcgtggtccaagctgctttccctcca
ctctacaaggaactcttcagcactgaaattgagtcacccgaagggctgtctgagtga
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