Ailuropoda melanoleuca (giant panda): 100472196
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Entry
100472196 CDS
T01329
Symbol
LTBP4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aml04990
]
100472196 (LTBP4)
Domain-containing proteins not elsewhere classified [BR:
aml04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
100472196 (LTBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
hEGF
EGF_3
EGF
FXa_inhibition
EGF_2
Plasmod_Pvs28
EGF_C8A_B_C6
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
100472196
NCBI-ProteinID:
XP_034494087
Ensembl:
ENSAMEG00000012327
LinkDB
All DBs
Position
12:complement(36104932..36127399)
Genome browser
AA seq
1580 aa
AA seq
DB search
MVLLALLGPQPVLGRPRERLRVRFTPAVCGLRCVHGPTGSRCTPTCAPRNATSVDSGAPG
GAAPGGPGFRAFLCPLICHNGGVCVKPDRCLCPPDFAGKFCQLHSSGARPPAPAMPGLTR
SVYTMPLANHRDDEHGVASMVSVHVEHPQEASVVVHQVERVSGSWEEADAEAVARAEAAA
RAEAAAPYTVLAQSAPREDSYSDASGFGYCFRELRGGECASPLPGLRTQEVCCRGAGLAW
GVHDCQSCSEHLGISDRVGTPDGPCPTGFERVNGSCQDVDECATRGRCQHGECANTHGGY
TCVCPDGFLHDSSRSSCISQHVISEAKGPCFRVLRDGGCSLPILRNITKQICCCSRVGKA
WGRGCQLCPPFGSEGFREICPAGPGYHYSASDLRYNTRPLGQEPPRVSLSHRAPPSTPRP
PSGELVSGGGDAISKGLPQPHKEKRREGTSKFRSPFTDTPSLPGFLPTHRPEPPPEPRPG
PELPPPSIPAWSGPEIPESGPSVGMCQRNPQVCGPGRCIPRPSGYTCACDSGFRLSPQAT
HCVDVDECRRVPPPCAPGRCENTPGSFHCVCGQGYRAGPRGTECLDVDECHRVPPPCDRG
RCENTPGSFLCVCPAGYQAAPHGAGCQDVDECTQSPGLCGRGVCENLSGSFRCVCPAGFR
GSACEEDVDECAQEPPPCGPGRCDNTVGSFHCACPAGFRSRGPGAPCQDVDECARSPPPC
AYGRCENTEGSFQCVCPTGFQPNAASSECEDVDECENHLACPGQECVNSPGSFQCRACPA
GHHLHHGRCTDVDECSSGASCGPHGHCTNTEGSFRCSCAPGYRAPSGRPGPCADVNECLE
GDFCFPHGECLNTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSGICTNTDGSFEC
VCPPGHRAGPDLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCD
DVDECQEYGSVICGAQRCENTPGSYRCTPACDPGYQPTPGGGCQDVDECRNRSFCGAHAV
CQNLPGSFQCLCDQGYEGARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPTSPEE
FDPMTGRCVPPRTSAGTFPGSQPQAPASPGVPARPPLPSPPRRPSPPRQGPVGSGRRECY
FDTAAPDACDNILARNVTWQECCCTVGEGWGSGCRIQQCPSTETAEYQSLCPHGRGYLAP
SGDLSLRRDVDECQLFRDQVCKSGVCVNTAPGYSCYCSNGYYYHAQRLECVDNDECADEE
PACEGGSCVNTVGSYHCTCEPPLVLDGSRRRCVSNESQSLDDNLGVCWQEVGADLVCSRP
RLDRQATYTECCCLYGEAWGMDCALCPAQDSDDFEALCNVLRPPAYGPPRPGGFGLPYEY
GPDLGPPYQGLPYGPELYSPPVLPYDPYPPPPGAFARREAPYGAPPFDMPDFEDDGGPYS
ESEAAVPPGPGSRWRYRSRDTRGSFPEPEESPEGGGYPGTLSGPYEGLEAEECGILDGCA
HGRCVRVPEGFTCDCFSGYRLDMTRMACVDINECDEAEAASPLCVNARCVNTDGSFRCIC
RPGFAPSHQPHHCTPARPRA
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctggcgctgctcgggccgcagcccgtgctgggccggccccgagagcgcctc
cgcgtgcgcttcaccccggccgtgtgcggcctgcgctgcgtccatgggcccaccggctcc
cgctgtaccccgacctgcgcgccccgcaacgccaccagcgtggacagcggcgcgcccggc
ggggcggccccggggggacccggcttccgcgccttcctgtgtcccttgatctgtcacaac
ggcggtgtgtgcgtgaagcctgaccgctgcctctgtcccccggacttcgctggcaagttc
tgccagctgcattcctcgggcgcccggccaccggccccggccatgccgggcctcacccgc
tcggtgtacaccatgccattggccaaccaccgcgacgacgagcacggcgtggcgtccatg
gtgagcgtccacgtggagcacccgcaggaggcgtccgtggtggtgcaccaggtggagcgt
gtgtccggctcttgggaggaggcggacgccgaggcggtggcacgggcggaggcggcggcg
cgggcggaggcggcggcgccctacaccgtgctggcacagagcgcgccgcgcgaggacagc
tattccgatgcctccggcttcggttactgctttcgggagctgcgcggaggcgaatgtgcg
tccccgctgcccgggctccggactcaggaggtgtgctgcagaggggcaggcttggcctgg
ggcgttcacgactgtcagtcatgctcggagcacttggggatttcagacagagtgggcacc
ccagatggaccgtgtccaacaggctttgaaagggttaatgggtcctgccaagatgtggat
gagtgcgcgacccgcgggcgctgccagcacggggagtgtgcgaacacgcacggcgggtac
acgtgcgtgtgccccgatggcttcctgcacgactcatcccgcagcagctgcatctcccag
cacgtgatttcagaggccaaagggccctgcttccgcgtgctccgcgacggtggctgctcg
ctgcccattctgcgcaacatcaccaagcagatctgctgctgtagccgcgtgggcaaagcc
tggggtcgaggctgccagctctgtccgcccttcggttcagagggttttcgggagatctgc
cctgctggccctggctaccactactcggcctctgacctccgctacaacaccagacccctg
ggccaggagccaccccgagtatccctcagccaccgggctccaccctccactcctaggcca
ccctcaggtgagctggtttctgggggaggagatgccatctccaaggggctgccccagcct
cataaggaaaaaaggagagaggggacatccaaattcaggtctccattcactgatacccct
tctttgccaggctttctgcccacccaccgtccagaacccccacctgagcccaggcctggc
cctgagcttcccccgcccagcatccctgcctggtctggtcctgagatccctgaatcaggt
ccctctgtgggcatgtgtcagcgcaacccccaggtctgcggcccgggacgctgcatcccg
cggcccagtggctacacctgcgcctgcgactctggcttccggctcagcccgcaggccaca
cactgcgtcgacgtggacgagtgtcgccgtgtgcccccgccctgtgcccccgggcgctgt
gaaaacacgccaggcagcttccattgcgtgtgcggccagggctaccgagcgggcccgcgg
ggcacggagtgcctggacgtggacgagtgccaccgtgtgccgccgccgtgcgaccgcggg
cgctgcgagaacacgccaggcagcttcctatgcgtgtgccccgctgggtaccaggctgct
ccccacggagccggctgccaggatgtggacgagtgcacgcagagcccaggcctttgtggc
agaggggtctgtgagaacctgtctggctctttccgctgtgtttgcccggctggcttccgg
ggctcggcgtgtgaagaagatgtggatgagtgcgcccaagagccaccgccctgtgggcca
ggccgctgtgacaacacagtgggctccttccactgtgcctgcccggctggcttccgctct
cgagggccgggggccccatgccaagatgtggacgagtgtgcccgcagccccccaccctgc
gcctatggccggtgtgagaacacggaaggctccttccagtgtgtctgccccacaggcttc
caacccaacgctgccagctccgagtgcgaggatgtggatgagtgtgagaatcacctggcc
tgtcctgggcaggagtgtgtgaactcacccggctccttccagtgcagggcctgtcctgct
ggccaccacctgcaccatggccgatgcactgatgtggacgagtgcagttcaggtgcctcc
tgcggcccccacggccactgcaccaacaccgagggctccttccgctgcagctgcgcgccc
ggctaccgcgcgccctcgggtcggcctgggccctgcgcagacgtgaacgagtgcctagag
ggcgacttctgtttcccgcacggcgagtgcctcaacaccgacggctcctttgcctgcact
tgcgcccccggctaccggcccggaccccgcggagcctcttgcctcgacgtggacgagtgc
agcgaggaagacctctgccagagcggcatctgtaccaacaccgacggctccttcgagtgc
gtctgtcctcccggacatcgtgccggcccggacctcgcctcctgcctcgacgtggacgaa
tgtcgcgagcggggcccggccctgtgcgggtcccagcgttgtgagaattccccgggctcc
taccgctgtgtccgagactgcgaccctggctaccacgcgggccctgagggcacctgtgac
gatgtggatgaatgccaagaatatggctcagtgatttgtggagcccagcgctgtgagaac
acccctggctcctaccgctgcacaccggcctgtgaccctggctaccagcccacgccaggg
ggcggatgccaggatgtggacgaatgccggaatcggtccttctgcggggcccacgccgtg
tgccagaacctgcccggctccttccagtgcctctgtgaccagggatacgagggggccagg
gacgggcgtcactgcgtggatgtgaatgaatgtgaaacactacagggtgtgtgtggagct
gccctgtgtgagaatgtcgaaggctccttcctctgtgtctgtcccaccagccctgaggag
tttgaccccatgactggacgttgtgttcccccacgaacttctgctggcacattcccaggc
tcacagccccaggcacctgccagcccgggtgtgcctgcccggccacctctgccatcccca
ccccgccggcccagcccacccaggcagggccctgtgggcagtgggcgccgggagtgctac
tttgacacggcggctccggatgcctgtgacaacatcctggcacggaatgtgacgtggcaa
gagtgttgctgcacagtgggcgagggctggggcagcggctgccgcatccagcagtgcccc
agcaccgagacagccgagtaccagtcactgtgcccccatggccggggctacctggcaccg
agcggagacctgagcctccggagggacgtggacgagtgccagctcttccgagaccaggtg
tgcaagagtggcgtgtgcgtgaacacggccccaggctactcgtgttattgcagcaacggc
tactactaccatgcccagcgactggagtgcgtcgataatgacgagtgcgcggacgaggag
ccggcgtgtgagggcggcagctgcgtcaacaccgtgggctcttatcactgcacgtgcgag
cccccgctggtgctggacggctcccggcgccgctgcgtctccaacgaaagccagagcctc
gatgacaacttgggagtgtgctggcaggaagtgggagctgaccttgtgtgtagtcgccct
cggctggaccgccaggccacctacacagagtgctgctgcctctacggtgaagcctggggc
atggactgtgccctctgccccgcccaggactcagatgactttgaggccctgtgcaatgtg
ctgcgtccacctgcatacggtcccccgcggccaggtggctttggactcccttacgaatat
ggccctgacctaggtccaccctaccagggccttccctatgggcccgaattgtattcgcca
cctgtgctcccctacgacccctacccacctcctcctggggccttcgcccgccgggaggcc
ccctacggagcaccacccttcgacatgcctgactttgaggacgacggtggcccctacagt
gaatctgaggctgccgtgccacctggcccaggcagccgctggcgctatcggtcccgcgac
acccgtggctccttcccagagcctgaggagtcacctgaaggtggaggctatcctggcacc
ctgtctgggccctacgagggactggaggcagaggagtgcgggatcttggatggctgcgcc
cacggccgctgcgtgcgtgtccccgagggcttcacctgcgactgcttcagtggctaccgc
ctggacatgacccgcatggcctgcgtcgacatcaacgagtgtgatgaggccgaggcggcc
tccccgctctgcgtcaatgcacgctgcgtcaacaccgatggctccttccgctgtatctgc
cgcccaggattcgcaccctcgcaccagccgcaccactgcacgcccgcgaggccgcgggcc
tga
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