Ailuropoda melanoleuca (giant panda): 100472266
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Entry
100472266 CDS
T01329
Symbol
CFAP52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aml03037
]
100472266 (CFAP52)
Cilium and associated proteins [BR:
aml03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100472266 (CFAP52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_VPS8
WDR54
Beta-prop_NOL10_N
Beta-prop_DCAF4
DUF7082
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100472266
NCBI-ProteinID:
XP_002921188
Ensembl:
ENSAMEG00000001999
UniProt:
G1L5I1
LinkDB
All DBs
Position
17:3893328..3933225
Genome browser
AA seq
620 aa
AA seq
DB search
MENQVSLKAEVAELELEAVIGFNGHVPTGLKCHPDQEHVIYPLGCTVLIQAINTQEQNFL
HGHDNNVSCVTISKSGVYLASGQVTFMGFKADIILWDYKKRELIARLSLHKGKIEALAFS
PNDLYLVSLGGPDDGSVVVWSIAKREAICGSPAAGLNVGNATTAIFSRCRDEMFVTAGNG
TIRVWELDLPNRKIWPTECQTGQMKRIVMSITMADDDSFFYLGTTTGDILKMNPRTKLLA
DTGPAKDKFSLGVSAIKCLKMGGLLVGSRAGLLVFCKSPSYKPIKKIQLQGGITSITLRG
EGHQFFVGTEESHIYRVNFTDFKETLIATCHCEAVQDIVFPSGTTDLFATCAKKDIRVWH
TLSNRELLRITVPNTTCHGIDFMRDGKSIISAWDDGRIRAFAPETGRLMYVINNAHRIGV
TAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTAS
TDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGSVIREL
EGSLSGSINGMDITLEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQ
YIVSVSADGAILRWKYPFTS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccaagtttcgctcaaagccgaggtggcggagctggagcttgaggccgtcatc
ggcttcaacggacatgtgcccactggcctgaaatgccatcctgaccaggagcatgtgatc
taccctctgggctgcacggtcctgattcaggcgataaacactcaagaacagaatttcctg
cacggtcatgacaacaatgtctcctgtgtgaccatctccaagagtggggtttacctagcc
tctggacaggtcacgttcatgggcttcaaggcagacatcattttgtgggattataagaaa
agggagctgattgcccggctgtcacttcacaagggcaaaattgaagcgttggccttctca
ccaaatgatttgtacttggtatcacttggaggcccagatgacggaagtgtggtcgtgtgg
agtatagccaagagagaagccatctgtggcagtcccgcggccggcctcaacgtggggaat
gccaccacagcgatcttctccaggtgccgggatgagatgtttgttactgctggaaatggg
acaatccgagtatgggaactggatctcccgaacagaaaaatctggccaactgagtgccag
acaggtcagatgaaaagaatagtcatgagtatcacaatggccgacgacgatagctttttc
tacctcggcaccacaactggagacattctgaaaatgaacccgaggaccaaactgctggca
gacactgggcctgcgaaggacaagttcagtctgggagtgtccgccatcaagtgcctgaag
atggggggtttgttggtgggttccagagccggattgctggtcttctgtaaaagccccagc
tacaaacccatcaagaaaattcagctacaaggtggcatcacgtcgatcacacttcgaggg
gaaggacaccagttttttgtaggaacagaagaatcacacatttatcgggtcaacttcacg
gatttcaaagagactctcattgccacatgtcactgtgaagctgtccaggacattgtcttt
ccatccggcaccaccgatctcttcgctacctgtgccaagaaggacatcagggtgtggcac
acgctctccaacagggagctgctgcgtatcactgtgcccaacacgacttgtcatggcatc
gatttcatgagggacggcaagagcatcatttcggcgtgggacgatggtagaatccgagcc
ttcgccccagagacaggccggctgatgtatgtcatcaacaacgcccacaggatcggagtg
acagccatcgccaccaccagtgactgcaaacgggtcatcagcggcggcggggaaggggag
gtgagggtctggcagattggctgccagacccagaagctggaggaggccctgaaggagcac
aagtcctccgtgtcctgcatcagggtgaagaagaacaacgaggagtgtgtcacggccagc
acggacgggacttgcatcatctgggatctcgtacgtctccggaggaatcagatgatcttg
gcaaataccttattccagtgtgtttgttaccaccccgaagagttccagatcatcaccagc
gggacagacagaaagattgcctactgggaagtctttgatgggtcagtaatcagagagttg
gaaggttctttgtctgggtccatcaatgggatggatatcaccctggaaggagtacacttt
gtcacaggtggaaatgaccatctggtcaaagtgtgggattataatgagggcgaggtgact
catgtcggggtgggacacagcggcaacatcacccgcatccggataagtccaggaaatcag
tacatcgttagcgtaagtgccgatggagcgattttgagatggaagtacccatttacctcc
tga
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