Ailuropoda melanoleuca (giant panda): 100472314
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Entry
100472314 CDS
T01329
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aml03009
]
100472314 (DCAF13)
04121 Ubiquitin system [BR:
aml04121
]
100472314 (DCAF13)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
90S particles
Other 90S particles
100472314 (DCAF13)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100472314 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
100472314
NCBI-ProteinID:
XP_011215535
Ensembl:
ENSAMEG00000001595
UniProt:
G1L464
LinkDB
All DBs
Position
9:70548555..70577494
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGYGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAKDYNQKLKEKFQHHPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVN
RLKHSKPGSVSVVSEKKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatgctgagccggaacccggacaactatgtccgcgaaaccaagctggac
ttacaaagagttccaagaaactatgatcctaccttacatccttttgaggtcccacgagaa
tacataagagctttaaatgctaccaaactggaacgagtatttgcaaaaccattccttgct
tctctggatggtcaccgagatggagtcaattgcttggcaaagcatccaaagagcctggct
actgtcctttctggggcatgtgatggagaggttagaatttggaacttgactaaacgaaaa
tgtatccgtacaatacaagcacatgaaggttttgtacgaggaatatgtactcgcttttgt
gggacttctttttttactgttggcgatgacaaaactgtgaagcagtggaaaatggatgga
ccaggctatggagaagaggaggaaccattgcatacaatattaggaaagacagtgtatacg
ggaattgatcatcattggaaagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaacaagtcctatatgttcaatgacctgggggttcgacagtataagt
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagtactatatgatatgaggcaagctactcccctgaaaaaggtcatcttagatatgaga
acaaatacaatttgttggaaccctatggaagctttcatttttactgcagcaaatgaagat
tacaacttgtatacttttgatatgcgtgcactggacacccctgtgatggtacatatggat
catgtgtctgcggtacttgatgtggattactctcccactgggaaagagtttgtgtctgct
agttttgataaatctattcgtatctttcctgtggacaaaagtagaagcagggaagtctat
cacacaaagagaatgcaacatgttatctgtgtaaaatggacctctgacagcaaatatatt
atgtgtggatctgatgaaatgaatattcgtctatggaaagctaatgcttctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagccaaagattataaccagaagttgaaggagaaa
tttcaacatcatcctcatataaaacgcattgctcgtcaccgacatctaccaaaatctatc
tacagccagatccaggaacagcgcatcatgaaggaagctcgccgacgaaaggaggtgaat
cgtctcaaacatagcaagcctggatctgtgtcagttgtgtcagagaagaagaagcacata
gtggcagttgtgaaataa
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