Ailuropoda melanoleuca (giant panda): 100472341 Help Entry 100472341         CDS       T01329                                  Symbol ACTN1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml04510   Focal adhesion aml04517   IgSF CAM signaling aml04518   Integrin signaling aml04519   Cadherin signaling aml04520   Adherens junction aml04530   Tight junction aml04670   Leukocyte transendothelial migration aml04810   Regulation of actin cytoskeleton aml05146   Amoebiasis aml05203   Viral carcinogenesis aml05322   Systemic lupus erythematosus Brite KEGG Orthology (KO) [BR:aml00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     100472341 (ACTN1)    04518 Integrin signaling     100472341 (ACTN1)    04519 Cadherin signaling     100472341 (ACTN1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100472341 (ACTN1)    04520 Adherens junction     100472341 (ACTN1)    04530 Tight junction     100472341 (ACTN1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     100472341 (ACTN1)  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     100472341 (ACTN1)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     100472341 (ACTN1)   09174 Infectious disease: parasitic    05146 Amoebiasis     100472341 (ACTN1)   09163 Immune disease    05322 Systemic lupus erythematosus     100472341 (ACTN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aml04131]     100472341 (ACTN1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:aml04812]     100472341 (ACTN1)    04147 Exosome [BR:aml04147]     100472341 (ACTN1) Membrane trafficking [BR:aml04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     100472341 (ACTN1) Cytoskeleton proteins [BR:aml04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      100472341 (ACTN1) Exosome [BR:aml04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100472341 (ACTN1)   Exosomal proteins of colorectal cancer cells    100472341 (ACTN1)   Exosomal proteins of bladder cancer cells    100472341 (ACTN1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI Uds1 FUSC Motif Other DBs NCBI-GeneID:  100472341 NCBI-ProteinID:  XP_034498675 Ensembl:  ENSAMEG00000014362 UniProt:  A0A7N5KIX7 LinkDB All DBs Position 14:complement(10485118..10578887) Genome browser AA seq 914 aa AA seqDB search MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR APENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLQQK DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPNVNARCQKIC DQWDSLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI NGKWDHVRQLVPRRDQALTEEHARQQHNEKLRKQFAAQANIIGPWIQTKMEEIGRISIEM HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR ETADTDTADQVMASFKILAGDKNYITVEELRRELPPDQAEYCIARMAPYTGHDAVPGALD YMSFSTALYGESDL NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atggaccattatgattcccagcaaaccaacgactacatgcagccggaagaggactgggat cgggacctgctcctggacccggcatgggagaagcagcagagaaagacattcacggcctgg tgcaactcccacctgcgcaaggcggggacacagatcgagaacatcgaggaggacttccgg gacggactgaagctcatgctgttgctggaggtcatctcaggggagcgcttggccaagccg gagagaggcaaaatgagggtgcacaagatctccaacgtcaacaaggccctggatttcata gccagcaagggggtcaagctcgtgtccattggagctgaagaaatcgtggatgggaatgtg aaaatgaccctgggcatgatctggaccatcatcctccgttttgccatccaggacatctct gtggaagagacctctgcgaaggaagggctgctcttgtggtgtcagagaaagacagcccct tacaaaaacgtcaacatccagaacttccacataagctggaaggatggcctcggcttctgt gccttgatccaccgacaccggcctgagctgattgactatgggaagctgcggaaggacgac ccactcacaaatctgaacacggccttcgatgtggccgagaagtacctggacatccccaag atgttggatgcggaagacatcgtcggaactgcccggccagatgagaaagccatcatgact tacgtgtccagcttctaccatgccttctctggagcccagaaggcggagacagcagccaat cgcatctgcaaggtgttggccgtcaaccaggagaatgagcagctcatggaagactatgag aagctggccagcgatctgttggagtggatccgccgcaccatcccgtggctggagaaccgg gcgccggagaacaccatgcacgccatgcagcagaagctggaggacttccgggactaccgg cgcctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacg ctgcagaccaagctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatg gtctcggacatcaacaatgcctggggctgcctagagcaggcggagaagggctacgaggag tggctgctgaacgagatccggaggctggagcggctcgaccacctggcagagaagttccgg cagaaggcctccatccacgaggcctggacggatggcaaagaggctatgctacagcagaag gactatgagaccgccaccctctcggagatcaaggccctgctcaagaagcatgaggccttt gagagcgacctggctgcccaccaggaccgcgtggagcagatcgctgccatcgcgcaggag ctcaatgagctggactattacgactcccccaatgtgaacgcccggtgccagaagatctgt gaccagtgggacagtctgggagccctgacccagaagcggagggaggctctggagcggaca gagaaactgctggagaccattgaccagctgtacttggagtatgccaagcgggctgcaccc ttcaacaactggatggagggggccatggaagatttgcaggacaccttcatcgtgcacacc atcgaggagatccagggactgaccacagcccacgagcagttcaaggccaccctccctgat gccgacaaggagcgcctggccatcctgggtatccacaacgaggtgtccaagattgtccag acctaccacgtcaacatggcgggcaccaacccctacacaaccatcactcctcaggagatc aatggcaaatgggaccatgtgcgacagttggtgccacggagggaccaggccctgacggag gagcacgcccgccaacagcacaatgagaagctacgtaagcagttcgcagcccaggccaac atcatcgggccctggattcagaccaagatggaggagatcgggcgcatctccattgagatg cacgggaccctggaggaccagctgagccacctgcggcagtacgagaagagcatcgtcaac tacaagcccaagatcgaccagctggagggcgaccaccagctcatccaggaggcgctcatc ttcgacaacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagctc ctcaccaccatcgccaggaccatcaacgaagtggagaatcagatcctgacccgagatgcc aagggcatcagccaggagcagatgaatgagttccgggcctccttcaaccactttgaccgg gatcactccggcacgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttat gatattggcaacgacccgcagaagaagacaggcatgatggacacggatgatttccgcgcc tgccttatctccatgggttacaacatgggagaggcagaatttgcccgtatcatgagcatc gtggaccccaaccgcctgggggtagtgacattccaggccttcatcgactttatgtctcgg gagacggccgacacagacacagcagaccaagtcatggcctccttcaagatcctggctggg gacaagaattacatcacggtggaagagctgcgccgagagctgccgcccgaccaggccgag tactgcatcgctcggatggccccctacaccggccacgacgccgtgccgggtgctctggac tacatgtccttctccacggcgctgtacggcgagagcgacctctaa

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