Ailuropoda melanoleuca (giant panda): 100472459
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Entry
100472459 CDS
T01329
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100472459 (COL10A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100472459
NCBI-ProteinID:
XP_002928686
Ensembl:
ENSAMEG00000013356
UniProt:
G1M3Z6
D2I0I9
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Position
10:complement(64828567..64867050)
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AA seq
674 aa
AA seq
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MLPRTALLLLMSLHLVHGGFYAEQYQTPTGIKGPPSNTKTQFFIPYAIKSKGVSVRGEQG
IPGPPGPAGPRGHPGPSGPPGKPGHGSPGPQGEPGLPGPPGPSATGKPGLPGLPGKPGEK
GPYGPKGDTGPAGLPGPRGPPGPSGLPGPAGITVPGKPGQQGPAGAPGPRGLPGEKGAPG
VPGAPGQKGEAGYGAPGRPGEKGLPGPQGPMGPPGPPGVGERGENGFPGQPGIKGDRGFP
GERGPAGPPGPQGPPGERGPEGIGKPGATGAPGQPGIPGTKGHPGAPGIAGPPGAPSFGK
PGLPGLKGQRGPIGLPGSPGAKGEQGPAGHPGQPGLTGPPGNIGPQGPKGMPGNQGIPGP
KGEMGPVGPAGHSGAKGERGSSGLDGKPGYPGEPGSNGPKGNPGLPGPKGDAGVRGPPGL
PGLVGPAGAKGMPGHSGETGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGIPGPPGPAGV
ATKGLNGPTGPPGPPGPRGHIGEPGLPGPPGPPGPPGQAAPSEGFIKAGQRPFVSANQGV
TGMPMSAFTVILSKAYPAVGIPIPFDKILYNRQQHYDPRTGIFTCRTPGTYYFSYHVHVK
GTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAVLDLTENDQVWLQLPSTGSNGLYSSE
YVHSSFSGFLVAPM
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacgaacagcccttttgctgctaatgtccttgcacctggttcatggaggattt
tatgctgagcaataccaaacacctacaggcataaaaggcccaccatccaacaccaagaca
cagttcttcattccctatgccataaaaagtaaaggtgtatcagtaagaggagagcaaggt
attcctggtccaccaggccccgctggacctcgagggcacccaggtccatctggaccacca
ggaaaaccaggccacggaagtcctggaccccaaggagagccagggttgcctggaccaccg
ggaccatcggccactgggaagccaggtttgccaggactcccaggaaaaccaggggagaaa
ggaccatacggaccaaaaggagatactggcccagctggtttaccaggaccacggggccca
ccagggccatctggactccccggcccagctggaattactgttccaggaaaacccggacaa
caaggacctgcaggagccccaggacccaggggccttcctggagaaaagggcgcaccagga
gtccctggtgcgcctggacagaaaggggaagcagggtatggagctcctggacgcccgggt
gagaagggccttccaggccctcagggtcccatgggaccacctggccctcctggagtggga
gaaagaggtgaaaacggatttccaggacagccaggcatcaaaggcgatcggggctttcca
ggagagaggggaccagctggcccgccaggcccccaaggtcctcctggggaacgagggcca
gaaggcattggaaagccaggagccacgggagccccaggccagccagggattcctgggaca
aaaggtcaccctggggctccaggaatagctgggcctccaggggctcctagctttgggaaa
ccagggctgccaggcctgaagggacaaagaggacctattggccttccaggaagtccaggt
gctaaaggggaacaaggcccagcaggtcatcctgggcaaccaggtctgactggaccccct
ggaaatattggaccccaaggaccaaaaggcatgccaggcaaccaagggattccaggccct
aaaggtgagatggggccagtggggcctgcgggacactctggggctaagggagaaaggggt
tcctctgggttagatggaaaaccagggtacccaggagaaccaggcagcaacggtcctaag
ggaaacccagggttaccaggcccaaaaggggacgctggagttcgaggacctcctggtctc
ccaggccttgtaggcccagcaggagctaagggaatgcctggacacagtggtgagactggt
ccaagaggtgcccctggaataccaggaaccagaggccccattgggccaccgggcattcca
ggattccctggatctaaaggggatccaggaattccaggtcctcctggcccagcaggtgta
gcaactaaggggctcaatggtcccactgggccaccagggcctccaggtccgagaggccac
attggagagcctggcctcccaggtcccccaggccccccaggccctccaggccaagcagcc
ccatctgaaggctttataaaggcaggccaaaggccttttgttagtgccaaccagggagtc
acaggaatgcctatgtctgctttcactgtcattctctccaaagcttacccagctgtaggt
attcccatcccatttgataagattttgtataacaggcaacagcattatgacccaagaact
ggaatctttacctgtaggacaccagggacatactatttctcctaccatgtgcatgtgaaa
gggacccatgtttgggtgggcctgtataagaatggcacccctgtaatgtacacttatgac
gaatacaccaaaggctacctggatcaggcttcgggcagcgctgtactcgatctcacggag
aacgaccaggtgtggctccagctacccagcactggatcgaatgggctgtattcctctgag
tatgtccactcctccttctcagggttcttggtggcaccaatgtga
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