Ailuropoda melanoleuca (giant panda): 100472570
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Entry
100472570 CDS
T01329
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aml03009
]
100472570 (DDX55)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100472570 (DDX55)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
Pre-60S particles
Helicases
100472570 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100472570
NCBI-ProteinID:
XP_002913145
Ensembl:
ENSAMEG00000015274
UniProt:
D2GW00
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All DBs
Position
12:complement(5702863..5716866)
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AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLPMRLHPRVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQIDEVLAHFMKPFPQFSQILWIGG
RNPGEDVARFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLQNHKQEKHLIFFSTCACVEYYGKALEALVKGVEVMCIH
GKMKYKRGKIFMEFRRSQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYINFLEINQKCPLQEMKLQKNVGDFLPKLKSMALADRAVFEK
GMKAFVSYIQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGRQFPDFVPTDIN
TDTIPFKDKVREKQRQKLLEQRRKEKRENEGRKKFIKNKAWSKQKAKKEKKKKMNEKRRR
EEGSDIEDEDMQELLNDTRLLKKFKKGKITEEEFEKGLFSSGKRAVPTADLGIPDLEEDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgccgatgcgactgcacccgcgggtg
ctgggtgccctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaacg
ctcgcttttgtcatccccatcctggaaattcttctgagaagggaagagaagttaaaaaag
aatcaggttggggcgatcatcatcacacccacacgggagctggctattcagatagatgaa
gtcctggcgcattttatgaagcccttcccacagttcagccagattctctggatcggaggc
aggaatcctggcgaagatgttgcaaggtttaaggaacaaggcgggaacatcattgtggcc
actccaggccgcttggaggacatgttccggaggaaggcagagggcttggatctggccagc
tgtgtgaggtccctcgacgtcctggtgttggacgaagcagacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacgcaggaagtggagagcctggtgcgagcgggactccggaaccct
gtccggatttcggtgaaggagaagggcgtagcggccagcagcactcagaaaactccttcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaatcagctggtacat
tttctccaaaatcataaacaggaaaaacacctaatcttcttcagcacctgcgcctgtgtg
gaatactatggaaaggctctggaggccctggtgaagggtgtggaggtcatgtgcattcac
gggaagatgaaatacaagcgcgggaagatcttcatggagttccgcagatcgcaaagtggg
attttagtgtgcacggatgtcatggcccgaggaatagacattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagcgcgagcgcctttgtgcatcgctgtggccgtacagcc
cgcatcggccatggtggcagcgcgctcgtgttcctccttcccatggaagagtcctacatc
aatttccttgaaattaaccaaaaatgccccctgcaggagatgaaactccagaaaaacgta
ggagacttccttccaaagctcaagtccatggccctggccgacagagctgtatttgaaaag
ggcatgaaagcctttgtgtcatacatccaggcttatgcgaagcatgaatgcaacctcatc
ttcagattaaaggatcttgattttgctagccttgctcgagggtttgccctgctgaggatg
cccaagatgccggagctgagaggaaggcagtttccagattttgtgcctacggatattaac
acagacaccattccctttaaagataaagttagagagaagcagaggcagaaactactggag
caacgaagaaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaaaaaaatgaatgaaaaaaggaggagg
gaagagggttctgatattgaagatgaggacatgcaggaactcctcaacgacacgaggctc
ttgaaaaagtttaagaaaggcaaaattactgaagaagaatttgagaaggggttgttttcg
agtggcaagagagcagtcccaacagcagatctggggatccctgatttggaagaggattgc
tga
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integrated database retrieval system
