Ailuropoda melanoleuca (giant panda): 100472583
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Entry
100472583 CDS
T01329
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100472583 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aml04990
]
100472583 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
aml04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100472583 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
DUF3854
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100472583
NCBI-ProteinID:
XP_011218250
Ensembl:
ENSAMEG00000009941
UniProt:
A0A7N5KRK1
D2H1J8
LinkDB
All DBs
Position
6:87604720..87669061
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AA seq
716 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLMLQKSKRPIPISTTAPPVQSPLTVIPHQKDPARDTNGSLAAL
SPNPEARASLGTLGTPELRQTFSSSFSQTSVFSSHMEASDPGPPWGSPGAKTSLEGALDS
LSPKVPQGSSQPRQYNNPIGLYSAETLREMAQMYHTSLRGKASGAGLPGGSLPIKDLTVD
SASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSST
PIEHAPVCTSQAATPLLPASAQPPSAAPPSAASPPLTAATAHAATASAAAPASSPADSPR
PQASAYSPAKATSPAPATHTYSEASAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGAN
YSPTPYTPSPAPAYTPSPAPTYSPSPAPAYTPSPAPSYNPTPSAAYSGGPVESASRPPWV
TDDSFSQKFAPGKSTTSISKPTLSRGTPAYTPTGPQVSPLARGIVQRAERFPASSRTPLC
GHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADMCFVEEQNNVYCERCYEQFFAPICA
KCNAKIMGEVMHALRQTWHTTCFICAACKKPFGNSLFHMEDGEPYCEKDYVTLFSTKCHG
CDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgaccctgaccgggcccgggccctggggcttccgtctccaggggggc
aaggacttcaacatgccgctcactatctcccggatcacaccggggagcaaggccgcccag
tctcagctcagccagggtgacctcgtggtggccatcgacggagtcaacacagacaccatg
acccatctggaggcccagaacaagatcaagtctgccagctacaacctgagtctcatgctg
cagaagtcgaagcgccccatccccatctccacaacagcacccccggtccagtcccctctg
acggtgatcccccaccagaaggaccccgcccgggacacgaacggcagcctggcagcgctc
agccccaaccctgaggcgagggccagcctgggcaccctgggcaccccggagctcaggcag
acctttagctcctccttctcccagacctctgtcttctcctcacacatggaggcctctgac
cccggccctccatggggcagcccgggggccaagaccagcctggagggagccctggactca
ctgagcccgaaagtcccgcagggctcgagccagccgaggcagtataacaaccccattggc
ctgtactcggcagagaccctgcgggagatggctcagatgtatcacacgagcctccgaggg
aaggcctcaggtgccggactcccaggagggagccttcctattaaagaccttaccgtggac
agcgcctcccccgtgtaccaggccgtgattaagaaccagaacaagccggaagacgaggct
gatgagtgggcccgccgctcctccaacctgcagtctcgctccttccgcatcctggcccag
atgaccgggacagaatacatgcaagaccctgatgaagaagctttgcgaaggtcaagcacc
cctattgagcatgctccagtgtgcaccagccaggccgccaccccgctgctgcccgcttct
gcccagccgccttctgctgcccctcccagtgcagcctcgccacccctgactgcagccact
gcccatgctgccaccgcctctgccgcagcccccgcctccagccctgcggacagtccaagg
ccccaggcctctgcctacagtcccgccaaggcgacctctccagcacctgccactcataca
tacagtgaggcctcagctgcccctgcgcccaagccccgggttgtcaccaccgccagcatc
cggccttctgtctaccagccagtgcctgcatctacctacagcccatccccgggggccaat
tatagtccaactccctacaccccctcgcctgctcctgcctacaccccctcgcctgccccc
acctactccccgtccccagcaccagcctataccccctcaccagccccaagttataaccct
acaccctcagcggcctacagcgggggccccgtggagtctgccagccgccccccatgggtg
acagatgacagcttctctcagaagtttgcccctggcaagagtaccacctccatcagcaag
ccgaccctgtcccgagggacccctgcctacaccccgacagggccccaggtgtctcccctg
gccaggggcatcgttcagcgggctgagcgcttcccagccagcagcaggactccgctctgt
ggccactgcaacaacgtcatcaggggcccctttctggtagccatgggccgttcctggcac
ccagaagaattcaactgtgcctactgcaagacctccctggcggacatgtgcttcgtggag
gagcagaacaatgtgtactgtgagcgctgttacgagcagttctttgccccaatctgtgcc
aagtgcaacgccaaaatcatgggggaagtgatgcatgccctgagacagacatggcacacc
acctgcttcatctgcgcagcatgcaagaaacccttcgggaacagcctcttccacatggaa
gatggggagccctactgcgagaaagactacgtcactctgttcagcaccaagtgtcatggc
tgcgatttccccgtggaggccggtgacaagtttatcgaagccctgggacacacctggcat
gacacgtgcttcatctgcgcggtctgccacgtgaatctggaggggcagccattctactcc
aagaaggacaaacccctgtgcaagaagcacgcgcacgccatcaacgtgtag
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