Ailuropoda melanoleuca (giant panda): 100472790
Help
Entry
100472790 CDS
T01329
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aml03009
]
100472790 (DDX52)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100472790 (DDX52)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
90S particles
Helicases
100472790 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
100472790
NCBI-ProteinID:
XP_002924934
Ensembl:
ENSAMEG00000013159
UniProt:
G1M3J1
LinkDB
All DBs
Position
13:10151161..10172944
Genome browser
AA seq
598 aa
AA seq
DB search
MDAHDLFRRLGAGAKFDVRRFSADAARFQVGKRKHEFDSSEVLQGLDFFGNKKSVPGECG
ASRTHQELQDEEKKEESLTERKREQKKKRKMMMSEITSQEEGSTIQWISSVEAKIEDKKI
KRENKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL
DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIIS
PTRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSQKFDILVTTPNRLIYLLK
QDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVE
QWCKLNLDNVITVSIGARNSAAETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQS
IERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGV
NLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEY
IKGFQKLLSKQKKKMIKKPLERDSISTTPKYFLEKAENKRKKVTGQNSKKKAALEDKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctctttcgtcggcttggcgcgggggccaaattcgacgtgagacgt
ttctctgcggacgcagctcgatttcaggtaggaaaaaggaaacatgagtttgattcttca
gaggtgctgcagggactggacttctttggaaacaagaagtctgtcccaggtgagtgtgga
gcatcaagaactcatcaggaacttcaagatgaagagaaaaaagaagagagcctaactgaa
aggaagagggaacagaagaaaaagaggaagatgatgatgtcagaaattacttctcaagaa
gaaggttctactatacagtggatatcatctgtggaagcaaagattgaagataaaaaaatt
aaaagagaaaataaactaacttcaggaaagttggagaatctcagaaaagaaaagataaac
ttcttccggaataaacacaaaattcatgtccaaggaactgatcttcctgacccaattgct
acatttcagcaacttgaccaggaatataaaatcaattctcgactgcttcagaacattctc
gatgcaggcttccagatgcctacaccaatccaaatgcaagccattccagttatgctgcat
ggccgagaacttctggcttctgctcctactggatctggaaagactttggcttttagcatt
cccattttgatgcacctaaaacaacccacaaataaaggcttcagagctctgatcatatca
ccgacacgagaacttgccaaccagattcacagagagttagtaaaaatctctgagggaaca
ggattcaggatacacatgatccacaaagcggcagtggcagccaagaaatttggacctaag
tcatctcagaagtttgatattcttgtgactactccaaatcgactaatttatctattaaag
caagatcctccaggaatagatttaacaagtgttgagtggctggtagtagatgaatcagac
aaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcctggcc
tgcacatctcataaggtcagaagagctatgttcagtgcaacttttgcttatgatgttgag
cagtggtgtaaactcaatctggacaatgtcattactgtatccattggagcaaggaactct
gcagcagagactgtagaacaagagcttctctttgttgggtctgagactgggaaacttctg
gccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcagtcc
attgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgttgatgtt
attcatgcagacagaacacagcaacagagagataacacagtccacagcttccgagctgga
aaaatctgggttcttatttgtacagccttgctggcccgagggattgattttaaaggtgtg
aacttggtgatcaactatgactttccaaccagctcagtggaatacatccacaggataggt
cgaactggaagagcagggcataaaggaaaagctgttacatttttcactgaagatgataaa
ccattattaagaagcgttgccaatgtgatacagcaggccggatgtcctgtgccagaatat
ataaaaggtttccagaaactactaagcaaacaaaagaaaaagatgattaagaagccattg
gaaagggacagcattagtacaactccaaaatatttcttagaaaaagctgagaataaacgg
aaaaaggtcactggtcagaacagcaagaagaaagcagctcttgaagacaaaagttaa
DBGET
integrated database retrieval system
