Ailuropoda melanoleuca (giant panda): 100472801
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Entry
100472801 CDS
T01329
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100472801 (YBX1)
03019 Messenger RNA biogenesis [BR:
aml03019
]
100472801 (YBX1)
03041 Spliceosome [BR:
aml03041
]
100472801 (YBX1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
100472801 (YBX1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100472801 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
100472801 (YBX1)
Spliceosome [BR:
aml03041
]
Common components
Common spliceosomal components
General mRNP proteins
100472801 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
100472801
NCBI-ProteinID:
XP_034509892
LinkDB
All DBs
Position
2:19222038..19243516
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AA seq
380 aa
AA seq
DB search
MSSEAETQQPPAAPPAAPALSAPAPFRVYPEGAARRLRRPEWAGRFPFPHVLPAPQPRPP
AGSAPRAHPRVLGSPRAASEEKGCQVVAGRRGAQRTSGNRGFLCLCVFFPPATKVLGTVK
WFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAAN
VTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQ
RRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPR
FRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETK
AADPPAENSSAPEAEQGGAE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgccccccccgccgcccccgccctc
agcgcncccgctcccttccgcgtgtaccctgagggcgcggcgcgccgcctacgcaggccc
gagtgggccgggcgcttccccttccctcacgtgctccccgccccgcagccgcgcccgccc
gcgggctccgcgccccgggcccacccacgtgtgctggggagcccgcgagcggcctcggag
gagaaaggctgtcaggtggtcgcgggccgccgcggagcgcaaaggacgtctggtaatcgt
gggtttttgtgtttgtgtgttttttttcctccagcaacgaaggttttgggaacagtaaaa
tggttcaatgtaagaaacggatatggtttcatcaacaggaatgacaccaaggaagatgta
tttgtacaccagactgccataaagaagaataaccccaggaagtaccttcgcagtgtagga
gatggcgagactgtggagtttgatgttgttgaaggagaaaagggtgcggaggcagcaaat
gtgacaggccctggtggagttccagtgcaaggcagtaaatatgcagcagaccgtaaccat
tatagacgctatccacgtcgcaggggtcctccacgcaattaccagcagaattaccagaat
agtgagagtggggaaaagaacgagggatcggaaagtgctcctgaaggccaggcccaacag
cgccggccctaccgccggcgtcggttcccaccttactacatgcggagaccctatgggcgt
cgaccacagtattccaaccctcctgtgcagggagaagtgatggaaggtgctgacaaccag
ggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggttatagaccacga
ttccgcaggggtcctcctcgccaaagacagcctagagaggatggcaacgaggaagataag
gaaaatcaaggcgatgagacccaaggtcagcagccacctcaacgtcggtaccgccgtaac
ttcaattaccgacgcagacgcccggaaaaccctaaaccacaagatggcaaagagacaaaa
gcagccgatccaccagctgagaattcgtccgctcccgaggctgagcagggcggggctgag
taa
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