Ailuropoda melanoleuca (giant panda): 100472877
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Entry
100472877 CDS
T01329
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X2
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100472877 (PRDM11)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100472877 (PRDM11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
DUF7822
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
FOG1-like_PR
DUF4954
Motif
Other DBs
NCBI-GeneID:
100472877
NCBI-ProteinID:
XP_011227085
Ensembl:
ENSAMEG00000000745
UniProt:
G1L1M3
LinkDB
All DBs
Position
16:73565766..73640178
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AA seq
1182 aa
AA seq
DB search
MLSHDRMTDNMKECLAQTKAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDPSTMEVEPK
KLKGKRELIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIP
QGMEVVKEASGENDVRCINEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSID
GSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGERLRVWYSEDYMKRLH
SMSQETIHRNLARGEKRLQREKSEQALGNPEDLRGPIQLPVLRQGKSPYKRGFDEGDAHP
QAKKKKIDLIFKDVLEASLETAKVEAHQLALSTSLVIRKVPKYQDDAYGRCAMSMSHGVQ
SVSRTQGEGDWKIPQGASKEPGPLEDEEEPSSFKADSPAEASLASDPHELPTTSFCPNCI
RLKKKVRELQAELDMLKSGKLPEPPVLPAQVLELPEFSDPAASESMVSGPAIMEDDDQEV
DSADESVSNDMLTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQY
TVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNT
AYHLALEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERLRQS
PCLSIILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFAA
LGIRLQDEKPTVGLGIDGANVTASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISG
KELPCLEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVL
NALIKDYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLA
YVFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAMKNLRVAEAK
FQSVREKICQKTQVILAQRFDSRSRIFVKACQVFDLAAWPRSSEELLSYGKEDMVQIFDH
LEAIPTFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLLGHICKYKQRFPLLNKII
QVLKVLPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDS
WFEEKSGNSYALSAEVLSRMSALEQKPVLQTVDHGSEFYPDI
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgctaagtcacgacagaatgactgacaacatgaaggagtgcctggcgcagaccaaggcg
gctgtgggggatatggtgaccgtggtgaagaccgaggtctgctcaccactccgagaccag
gagtatggccagccctgctctaggagaccagacccctcaaccatggaagtggagcccaag
aaactgaaggggaagcgtgagctcatcatgcctaaaagcttccagcaagtggacttctgg
ttctgcgagtcctgccaggagtactttgtggatgagtgcccgaaccacggtcccccagtg
tttgtgtccgacacgccagtgcccgtgggcatcccagacagggctgccctcaccatccca
cagggcatggaggtggtcaaggaagccagtggggagaatgacgtgcgatgcataaatgag
gtcatccccaagggccacatcttcggcccctatgaggggcagatctccacccaggacaaa
tcagctggcttcttctcctggctgattgtggacaagaataaccgctacaagtccatagat
gggtcagatgagactaaagccaactggatgaggtacgtggtcatctcccgggaggagagg
gagcagaacctgctggcgttccagcacagcgagcgtatctacttccgagcgtgccgggac
atccggcccggggagcggctccgggtctggtacagcgaggactacatgaagcgcttgcac
agcatgtcccaggagaccatccaccgcaatctggctagaggagagaagaggttgcagagg
gagaagtctgagcaggctctggggaacccagaagacctgaggggtcccattcagctcccc
gtgttgagacagggcaaaagtccgtacaagcgtggctttgacgagggggacgcacacccc
caggccaagaagaagaagattgacctcattttcaaggacgtgctggaggcttccctggaa
accgcgaaggtggaggctcatcagctcgccttgagcacctcgctggtcatcaggaaggtc
cccaagtaccaggacgacgcctacggtcggtgtgcaatgagcatgtcacatggcgtgcag
agtgtcagccggacccagggggagggggactggaagatcccccagggggcttccaaggag
ccaggcccgttggaggatgaagaagagccttcgtccttcaaggccgacagtcccgccgag
gcctcccttgcgtccgaccctcacgagcttcccaccacctccttttgccctaattgtatt
cgcctcaagaagaaggtccgggaactccaggccgaactagacatgcttaagtctgggaag
cttccggaaccccccgtcttgccagcacaggtactggagctcccagagttctcggaccct
gcagcctccgagagcatggtctccggccccgccatcatggaggacgacgaccaggaggtc
gattccgcagacgagtccgtctccaacgacatgctgaccgccaccgacgagccctccaag
atgtcatccgccaccgggcgccgcatccggcgcttcaagcaggagtggctgaagaagttc
tggttcctgcggtactcgccgaccctcaacgagatgtggtgccacgtgtgccgccagtac
accgtgcagtcgtcccgcacgtcggccttcatcatcggctccaagcagttcaagatccac
accatcaagctgcacagccagagcaacctgcacaagaagtgcctgcagctgtacaagcta
cggatgcaccccgagaagacggaggagatgtgccgcaacatgacgctgctcttcaacaca
gcctaccacctggccctcgagggccggccctacctggacttccggccgctggccgagctg
ctgcgcaagtgcgagctcaaggtggtggaccagtacatgaacgagggcgactgccagatc
ctcattcaccacatcgcccgcgcgctgcgggaggacctggtggagcgcctccgccagtcg
ccctgcctcagcatcatcctggacgggcagagcgacgacctgctggccgacacggtggcc
gtctacgtccagtacaccagcagcgacgggccaccggccaccgagttcctgtccctgcag
gagctgggcttctccagcacggagagctacctgcaggcgctcgaccgcgcctttgccgcc
ttgggcatccggctgcaggacgagaagcccaccgtcggcctgggcatcgacggggccaac
gtcacagccagcctgcgggccagcatgttcatgacgatccgcaagacgctgccctggctg
ctgtgcctgcccttcatggtgcaccggccccacctggagatcctggacgccatcagcggg
aaggagctgccctgcctggaggagctggagaacaacctgaagcagctgctgagcttctac
cggtactcgccgcgcctcatgtgcgagctgcgctccacggcgtccaccctgtgcgaggag
acggagttcctgggggacatccgtgccgtgaggtggatcatcggggagcagaacgtcctc
aacgccctcatcaaagactacctggaggtggtggcccacctcaaggacgtcagcagccag
acgcagcgggccgacgcgtccgccatcgcgctggccctgctgcagttcctcatggactac
cagtccatcaagctcatctacttcctcctggacgtgatcgccgtgctctcacgcctggcc
tacgtcttccagggcgagtacctcctggtgtcccaggtggacgacaagatcgaggaggcc
atccaggagatcagccggctggccgactccccgggggagtacctgcaggagttcgaggag
aactttcgagagagcttcaacgggatcgcgatgaagaacctcagggtggccgaggccaag
ttccagtctgtcagggagaagatctgccagaagacccaggtgatcctggctcagaggttc
gattcccgcagtcggatcttcgtgaaggcctgccaggtgttcgacctggccgcctggccc
cggagcagcgaggagctgctgagctatggcaaggaggatatggtgcagatattcgaccac
ctggaggccatccccaccttctcgcgggatgtctgcagggaagggctggacccgcggggc
agcctgttgatggagtggcgggagctcaaggcggattactacaccaagaatggcttcaaa
gacctgctcggccacatctgcaagtacaaacagcggttcccgctcttgaacaagatcatc
caggtcctcaaagtcctgcccacgtccaccgcctgctgtgagaaaggccgcaatgccctg
cagcgggtgcgcaaaaaccaccgctcccgcctgaccctggagcagctcagcgacctgttg
accatcgcagtgaatggcccgccgatcgccaacttcgatgccaagcgagccctggacagc
tggttcgaggagaagtccggcaacagttacgcgctgtccgccgaggtcctcagcaggatg
tcggcgctggaacagaagcccgtgctgcagaccgtggaccacgggtcagagttttacccg
gacatctag
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