Ailuropoda melanoleuca (giant panda): 100472933
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Entry
100472933 CDS
T01329
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X3
KO
K15623
protein SSXT
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
aml05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100472933 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100472933 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100472933 (SS18L1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100472933 (SS18L1)
GBAF(ncBAF) complex
100472933 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100472933
NCBI-ProteinID:
XP_011224628
Ensembl:
ENSAMEG00000013466
LinkDB
All DBs
Position
13:complement(46579147..46608816)
Genome browser
AA seq
380 aa
AA seq
DB search
MLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNM
SLGPGALSQSGSSQGLHAQGSLSDAMGTGLPPSSLMQGQIGNGPNHVSMQQTAQSTLPTT
SMSMSGSGHGSGPGYSHSGPASQSVPLQGQGAIGNYVSRANINMQSNPVSMMHQQAASSH
YSSAQGGSQHYQGQPSIAMMGQSGQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGGEQ
YGHSQAASEPMSQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQTG
YQQGAAQQQAGYQQQYPNQQSYPGQQQGYGPAQGAASQYSGYQQGQGQQYGSYRASQTGP
SAQQQRPYGYEQGQYGNYQQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgagaaccaccacctgatacagtgtatcctggactaccagagcaagggcaag
acggctgagtgcacccagtaccagcagatcctgcaccggaacttggtctacctggccacg
atcgcggactccaaccagaacatgcagtccttgctccccgccccgccaacccagaacatg
agcctgggccccggagcgctgtcccagagcggctccagccagggcctgcatgcccagggc
agtctcagcgatgccatgggcacgggcctgcccccgtcctccctcatgcagggccagatc
ggcaacggtccgaaccatgtgtccatgcagcagaccgcacagagcacgctgcccaccacc
tccatgagtatgtcaggcagcggccatggctcggggcctggctacagccactcgggaccc
gcctcacagagcgtgcccctgcagggccagggcgccatcggcaactacgtgtcccgggcc
aacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcctcgtcccac
tacagctcggcacagggcgggagccagcactaccagggccagccgtccattgccatgatg
ggccagagcggccagggcagcagcatgatgggacagcggcccatggcgccctaccggccc
tcccagcaagggtcgtcccagcagtacctgggccaggaggagtactacggcggcgagcag
tatggccacagccaggctgcctcggagcccatgagccagcagtactaccctgacggacac
ggtgactacgcctaccagcagtcgtcctacacagagcagagctacgaccggtcctttgag
gagtctacacagcactactacgaaggcggaaactcgcagtacagccagcagcagacgggg
taccagcagggtgcagcccagcagcaggcggggtaccagcagcagtaccccaaccagcag
agctaccccgggcagcagcaaggctacgggcctgcccagggagccgcctcgcagtactcc
ggctaccagcaaggacaagggcagcagtatggaagctacagagcgtcccagacgggcccg
tccgcccagcagcagcggccgtacggctatgagcagggccagtatggaaattaccagcag
taa
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integrated database retrieval system
