Ailuropoda melanoleuca (giant panda): 100473014
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Entry
100473014 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-associated protein-like 3
KO
K24337
contactin associated protein-like 3/4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aml04990
]
100473014
Domain-containing proteins not elsewhere classified [BR:
aml04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
100473014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
COLFI
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
100473014
NCBI-ProteinID:
XP_034502979
Ensembl:
ENSAMEG00000017286
LinkDB
All DBs
Position
17:18027554..18233270
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AA seq
1314 aa
AA seq
DB search
MDPAAGAFLGLLFLLSAQPWSPVVAGNTYTCDAPLASTLPRESFSSSSELSSSHGPGFAS
LNRRDGAGGWSPLVSDKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYILMFSDGGRNW
KQYRREESISGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPKGRIGMRIEVYGCAYR
SEMVNFDGKSSLLYTFNQKSVSPTKDVISLKFKTRQTDGILLHREGQNGKHITLELVKGK
LILSLNSGHASLSSPDAHVTLTLGSLLDDQHWHSVLIELLNSHVNFTVDRHTQHFQAKGE
SSYLDLDYEISFGGIPGHGKSVAFPHKNFHGCFENLYYNGVDIIDLSKKHKPQIHLMGNV
SFSCSQPQNVPVTFLSSRSYLALPGTPGEDKVSVTFQFRTWNRAGLLLTTQLQHGPGALV
LVLNDGKLQLSLSQPGHPARDVTTGAGLSDGQWHSVSLSLKGNHLSVMVDGEAATVAHSL
RGRIDSGDTYYWGGCPDSRSGPGCGGPLAGFQGCVRLISIGDKAVDPITVQQGAFGSFRD
LQIDTCGLMDRCLPSYCEHGGECSQSWDTFSCDCAHTGYTGATCHSSLYEQSCEAHKHRG
NSSGLYYIDSDGSGPLGPALVYCNMTEDTTWTSVQHNGSHLARVKSSNGESPHPVFFKYT
ASMDQLQAIIDRADHCQQELAFHCKKSRLSASHDGTPVSWWVGRTNETHTYWGGSLPDAQ
KCACGLQGNCLDSQYYCNCDAARNEWTSDTVVLSHKEHLPVTQVAMRDTGQPHSEAAYAL
GPLLCWGDNSFWNSASFNTETSYLHFPTFRGELSADVSFFFKTTAPSGVFVENLGITDFI
RLELHAPAEVTFSFDVGNGRCEVTVRSPTPFNDNRWHHVRAERNVKEASLQVDQLPSKTQ
PAPADGHARLQLNSQLFVGGTATRQRGFLGCIRSLRLNGLALDLEERATMTPGVEPGCPG
HCSSYGHLCRNGGRCRERPRGIACDCAFSAYDGPFCESEISAYFGTGSSVIYNFQEHSNY
TFSKNSSSFAALFHEDLTLAGEMATLSFRTTGTPSLLLYVSSFYEEYLSVILAPNGSLQI
RYKLDRHQEPDVFNFGFKNLADGQLHQVKIHRDAALVSVEVNQNARRQVILSSGTEFNAV
KSLTLGTILEPPGADPDTLRAGARGFTGCLSAVRFGPAAPLKAALRPGGPXPVTVRGHVA
AASRCAEGAGSGAPAREAIRPLAGGAGGSGPTDGGEPLVNADRSDSAVIGGVIAVVIFIS
LCVTAIAIRIYQQRWLYQKNESNIPQTGDNAETALKSEVNMQSTVSESQKEYFF
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgcgggagccttcctcgggttgctctttcttttgtctgctcagccctgg
agcccagtagtggcagggaatacttatacctgtgatgccccgctggcgtccaccttgccg
cgagagtccttcagcagctcgtcggagctgtccagcagtcatggcccagggtttgcaagt
cttaatcgcagagatggggctggtggctggtctccacttgtgtcagataaataccagtgg
ctgcagattgaccttggagagagaatggaggtcacggctgtggccacccagggagggtac
gggagctccgactgggtgaccagctacatcctcatgttcagtgacggcgggaggaactgg
aagcagtatcggcgagaagaaagcatctcgggttttccaggaaacacaaacgcagacagt
gtggtgcattaccgactgcagcctcccttcgaagccaggttcctgcgcttcctcccctta
gcctggaaccctaagggcaggatcgggatgcggatagaagtgtacggatgcgcataccga
tctgagatggttaattttgatggaaaaagctccttgctatacacatttaatcagaaatcc
gtgagtccaacaaaagatgttatttctttgaaatttaaaaccaggcagactgatgggatt
ctactccacagagaaggacaaaatggcaaacacatcactctggagttagttaaaggaaaa
ctcatcttatcccttaattcaggccatgctagcctgtcctcccctgacgcccatgtgacc
ctcaccctgggcagcctgctggacgaccagcactggcattctgtcctcatcgagctcctg
aactcacacgtcaacttcacggtggacaggcacactcagcatttccaggcaaagggcgag
tccagctatttggatcttgattatgagatcagctttggagggattcctggacacggaaaa
tcagtggcattcccacataaaaactttcacggctgcttcgaaaatctctactataatgga
gtggatatcattgatttgtccaagaaacacaaaccacagatccacctcatgggaaacgtg
tccttctcgtgctcacagcctcaaaatgtgcctgtgacttttctgagctccaggagttac
ttggcactgccaggcacccccggagaggacaaagtgtcggtcactttccaatttcgaacg
tggaacagggcagggctgctgctgaccacgcagcttcaacacgggccaggggctctcgtc
ctcgttcttaatgatggaaaactccagctgagtctgtcccagcccggacatccagcgagg
gatgtcacaacaggtgctggattaagtgatgggcagtggcattcagtgtccttatcattg
aaaggaaatcacctgagtgtgatggtggatggagaggcagccactgtggctcattccctg
cgcgggcgaatcgactcaggggacacctattattggggcggctgtcccgacagcaggtct
ggccctggatgtggaggccccctggccgggtttcagggctgcgtgaggctcatctccatt
ggcgacaaggcagtggatcccatcacagtacagcagggggcgttcgggagtttccgtgac
ctccagatagacacctgtggcctcatggacaggtgtttgcccagctattgtgaacatggg
ggcgaatgttcccagtcctgggacaccttctcctgtgactgtgcgcacacgggctacacg
ggcgcgacctgccattcctctttgtacgagcagtcctgtgaagcccacaagcacagagga
aactcctcagggctctactatatcgattcagacggaagtggcccgctgggacctgctctt
gtatattgcaacatgacagaagacaccacctggacctcagtgcagcacaatggctcccac
ttggccagggtcaaaagctcgaatggagaaagcccccaccctgtgtttttcaagtacaca
gccagcatggaccagctccaagccatcattgaccgtgcggaccactgccaacaggagctg
gctttccactgcaagaagtcaaggctctcagccagccacgatggaaccccagtgagctgg
tgggttggaagaaccaatgaaacacacacttactggggaggttctctgcctgatgctcaa
aaatgtgcttgtggattacaggggaactgccttgattctcagtattactgcaactgtgat
gctgcccggaatgaatggaccagcgacacagtagtcctttcccataaggagcacctgcca
gtcactcaggttgcgatgagagacacaggccaaccacattcagaagcggcttatgcactg
gggcctctgctctgctggggggacaattcattttggaattccgcctctttcaataccgag
acttcataccttcacttccctacgttccgtggagagctcagtgctgacgtgtctttcttt
tttaagacaacagctccttctggggtgtttgtagagaatctggggatcacagacttcatc
aggctagagctgcacgctcctgcagaagtgaccttttcctttgatgtggggaacgggcgt
tgtgaggtcaccgtgcggtctcccactccctttaacgacaaccggtggcatcacgtgagg
gcagagaggaacgtgaaggaggcatcccttcaagtggatcagctccccagcaagacgcaa
ccagcgccggctgacggccacgcccgcctccagctcaacagccagctcttcgtgggtggg
acggccaccaggcagagaggcttcctgggctgcattcggtcgctgcggttgaatgggctg
gccctggacctggaagaaagggccacaatgacgccaggcgtggagccaggctgcccagga
cactgcagcagctacggacacttgtgtcgcaacggagggagatgtagagagagacccagg
ggcatcgcttgcgactgtgccttctctgcgtacgacgggcctttctgcgagagcgagatt
tctgcctattttggaactggctcgtcagttatctacaactttcaagaacattccaattac
accttcagtaagaactccagctcctttgcagctttatttcatgaggatctgacgctggcc
ggcgaaatggccacactgagcttccggaccacggggacgcccagcttactcctctatgtg
agctccttctacgaggagtacctgtccgttatcctcgcccccaatggaagtttgcagatc
aggtataagctggacaggcaccaggaacctgatgtttttaactttggttttaaaaacctt
gccgatgggcagcttcaccaggtgaagattcacagagacgcggctctggtctctgtagag
gttaaccagaatgcaaggagacaagtcatcctgtcgtcagggacagaattcaatgctgtc
aaatcccttacgttggggacaattttagagccccccggcgcggacccggacacgctgcgg
gccggcgcgcgtggcttcaccggctgcctctcggccgtgcgcttcggccccgccgctccg
ctcaaggctgcgctgcgccccggcggccccnncccggtcaccgtgcgcggccacgtggcc
gccgcgtcccgctgcgcggagggggcgggatccggagccccggcgcgggaggccatccgc
ccgctcgcaggtggcgcaggtggttctggaccaacagatgggggagaacccttagttaat
gctgacagaagtgactctgctgtcatcggaggtgtgatagcggtcgtgatatttatctcg
ctctgcgtcaccgccatagctatacgcatttatcagcagagatggttataccaaaaaaat
gagtcaaatattccccaaactggagacaacgctgagactgctctgaaaagtgaggtcaac
atgcaaagtacagtcagtgaaagccagaaagagtacttcttctga
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