Ailuropoda melanoleuca (giant panda): 100473144
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Entry
100473144 CDS
T01329
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml05014
Amyotrophic lateral sclerosis
aml05017
Spinocerebellar ataxia
aml05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100473144 (ATXN2L)
05017 Spinocerebellar ataxia
100473144 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
100473144 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100473144 (ATXN2L)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100473144 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
100473144
NCBI-ProteinID:
XP_034526061
Ensembl:
ENSAMEG00000015502
LinkDB
All DBs
Position
10:16958669..16971026
Genome browser
AA seq
1116 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPQQQHQERPGATAIGSARGQSTGKGPPQSPVSGTPHPQ
STEVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASE
PAGGPRREDIVDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQ
RWEGGDSNSDDYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEF
RQRELRAAQLAREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKY
IPLPQRVREGPRGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMS
PKAQRPLRGGAKTLSSPSSRPSGEASVPPPPAAFPLLPVGRMYPPRSPKSAAPAPISASC
PDAPMGSAVPTSSASIPVTSSVVDPGVGSVSPASPKISLAPTDVKELPAKEPGRTLESQE
LSRIAGKVPGLQNEQKRFQLEELRKFGAQFKLLPSSSPETILDPFPPRILKEEAKGKEKE
VDGLLSSEPVGSPVSSKTESVSDKEDKPPLPPAGGTEGPEQPPPPCPSQTGSPPVGLIKG
DDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQ
SGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSSSVPGQQGKYRGAKGSLPPQRSDQHQPA
SAPPMMQAAAAAGPPLVAATPYSSYIPYTPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNP
RMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGS
QPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQP
AAVYAIHAHQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPP
QGAVPQSGVPALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGL
APGSVLCFPPSSLSCDPAAPLPTASPALSDPDCLLT
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtagcccgccggcctcccgggggcaccagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccccagggcctcccgcggccgcttctccctgcctgggg
cctgcagccgccgccgggagcgggctccgccggggagccgagggcatcttggcgccgcag
ccgccgccgcagcagcaacatcaggagaggccaggggcaacggctatcggcagcgccagg
ggacaaagcacaggaaagggacccccacagtcaccggtgagtggcactccgcacccgcaa
agtacagaggtgttcgagggtgtctacaacaattccagaatgctgcattttcttacagct
gttgtgggctccacttgtgatgtaaaagtgaagaatggtaccacttacgaaggtatcttc
aagactctgagctcaaagtttgaactagcagtagacgctgtacaccggaaagcatctgag
ccagcaggtggccctcgtcgggaagacattgtggacaccatggtgtttaagccaagtgat
gtcatgcttgttcacttccgaaatgttgacttcaattatgctactaaagacaagttcact
gattcagccattgccatgaactcaaaggtgaatggagagcacaaagagaaggtgcttcag
cgctgggaagggggcgacagcaacagtgatgactatgacctcgagtctgacatgtccaat
ggatgggaccccaacgaaatgttcaagttcaacgaggagaactatggtgtgaagaccacc
tatgacagcagtctttcttcttacacggtgcccttggagaaggacaactcagaagagttt
cgtcagcgggagctgcgtgcagcccagttggcccgagagattgaatcgagcccccagtac
cgcctgaggatcgccatggagaatgatgatgggcgcaccgaggaggagaagcacagcgca
gtccagcggcagggttcaggacgggagagccccagcttggcatctagggaaggaaagtat
atccctctaccccaacgagttcgggaaggtccccggggaggagttcgatgcagtagttcc
cggggtggccggcctggccttagctccttgccacctcgtggtcctcaccaccttgacagt
agcagccctggcccaggttctgagacacgtggtatcaacggaggcccttcccgcatgtcc
cctaaggcacagcggcctctgagaggtggtgccaagactctgtcttcacccagcagtagg
ccttctggagaagcttctgttccacctcctcctgcagctttccctttacttccagtgggc
cggatgtacccaccgcgctctcccaagtcagctgcccctgccccaatctcagcttcctgt
cctgatgcccccatgggatcagcagtaccgacctcttcggcttccatccctgtgacatca
tcggttgtggatcctggagtaggctctgtttccccagcttctccaaagatctcattggcc
cccacagatgtaaaagaactcccagccaaggaacctgggagaacactggagtcccaggag
ctgtcccggatagctgggaaagtccctggccttcagaatgaacaaaaacgctttcaactg
gaagaactgaggaagttcggggcccagtttaagctgctgcccagtagctcccctgagacc
atcctggatccttttcctccccggatcttaaaggaagaggccaaagggaaagagaaggag
gttgatggtctattgagttcagagccagtggggtccccagtctcctcaaagacggagtcc
gtatcggataaggaggacaagccgcccctgccgccggcagggggcacagaggggccggag
cagccccctccaccttgcccaagccaaactggcagccccccggtgggcctcatcaaggga
gacgacaaagatgagggcccggtcgctgaacaagtgaagaagtcaacactgaaccccaac
gccaaggagttcaatcccacaaagcctctgctgtctgtgaataaatccaccagtacccca
acttctccggggccccggactcactcaactccctccatcccggtgctgacagcaggccag
agtgggctctacagcccccagtacatttcttacatacctcagatccatatgggaccagct
gttcaggcacctcagatgtatccgtaccctgtatccagttctgtgcctggacagcagggc
aagtaccggggagcaaaaggctccctgcccccccagcgctcggaccaacaccagccagcc
tcagcccctccgatgatgcaggccgccgccgccgctggcccgcctctggtggctgccacg
ccgtactcttcctacatcccttacaccccgcagcagttcccgggccagcccgccatgatg
cagcccatggcccactacccctcgcagccggtgtttgcccccatgcttcagagcaaccca
cgcatgctgacgtcggggagccatccccaggccattgtgtcgtcctccacccctcagtac
ccttctgcagagcagcccaccccccaagccctctatgccactgttcaccagtcctatcca
caccatgccacgcagctccatgcccaccagccgcagccggccaccacgcctactgggagc
cagccgcagtcccagcatgcggcccccagtcccgtccagcaccaggcggggcaggcccca
cacctgggcagtggacagccacagcagaatctgtaccacccaggggccctgacaggcacg
ccgccttctctgccaccgggaccttctgcccagtcccctcagagcagcttcccccaacca
gccgctgtgtatgccatccatgcccaccagcagctgccccacggcttcaccaacatggcc
catgttacccaggcccatgtccaaactggaatcacagcagccccgccccctcaccctggg
gctccccacccgccccaggtgatgctgctgcatccaccccagagccatgggggacccccc
caaggcgcggtgccccagagtggggtgcctgcactctcagcttccacaccctcaccctac
ccctacatcggacacccccaaggtgagcagcctggccaggcgcctggatttccaggagga
gccgatgacaggattctatgtagggtgggcagaagccacagtcgccgccgccaggggctt
gctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgatccagcagccccc
ctccccactgcctccccagctctcagtgaccccgactgtctcctgacttag
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