Ailuropoda melanoleuca (giant panda): 100473158
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Entry
100473158 CDS
T01329
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aml04990
]
100473158 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
aml04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100473158 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
NACHT
AAA_16
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_DCAF4
NPHP3_N
Beta-prop_NUP159_NUP214
KNTC1_N
WDR90_beta-prop_4th
Beta-prop_LRRK2
AAA_22
Beta-prop_SCAP
ATPase_2
AAA
nSTAND1
DUF4062
Beta-prop_Vps41
Imm5_like
AAA_5
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
100473158
NCBI-ProteinID:
XP_002912756
Ensembl:
ENSAMEG00000010118
UniProt:
G1LUA3
LinkDB
All DBs
Position
4:12225178..12287655
Genome browser
AA seq
1565 aa
AA seq
DB search
MDAEREALQSTAFPEVQTFCQKHGLMFEVVDLRWGIQNTEATDHMTTELCLEELDRCRKT
SIGPAFVALLGDQYGPCPVPTLIEEKEWEALRAQLTSRPRDLELVARRFRRDENAVPPTY
LLQALGTVEAHGPEEVTLTSVLRSGAQEARRLGLITQEQWHRYHWSVIEWEIDRGLLSLT
DGDQGATIFLREIQDLNKHILEDCALKMVDRLADGCLDTDAQNLLSGLKGRIADVQPGVL
KAHHLPWSRDLVNPKNKAHARYLKELGEQFVARANHQVLEHLQELEAGRQELAWLYQEIR
HHLGLSAEATRIFCGRQELLAQLGQRLRQSDGRPHSPLVLFGPPGIGKTALMCKLAEQIP
GLLGRKTVTVLRLLGTSQMSTNARGLLQSICFQLCLAYGLPLPPAQVLEAHARVVQFFHT
LLHTVSCRNFESLVILLDSVDDVDSVRRARRVPWLPPKCPPRVHLILSVCSGWQGVLDTM
RQTLTDPEAYWEVKPLSGNQGQEMIQLLLASSRRTLSPEQRDLLWASLPECGHPGRLRLA
FEEARKWASFTIPAPLASTAREAMHQLCARLEQTHGQLLVAHVLGYIVSSRHGLSEAELK
DVLSLDDEVLQVVYQDWSPPSKELLRFPPLLWVRLRRDLGHCLARRPVDGFTLLAIAHRQ
LAEVVQERYLPGPERAKRHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAPQPLWF
SDTVANLRKLKELPHHLVHSGRIEELKQEVLGSMNWISCRGISGGIEGLLDDFDLYAPHL
DCPEVSLVRDALQLCRPAVELRGMERSVLYTELLARLHFFAASHPALVGQLCQQAQSWFR
VCPHPVLIPLGGFLQPPGGPLRATLTGCHKGITAMAWSLEEKLLVVGCQDGIVAVWDMGE
QQVIHILTGHTGEVRCVEVFAKGTLALSASKDHTLRLWDLLSGQEKFTIWDGGSKSPTDP
EIWSLHMDEAKKVVYVASGSKVSAWNLETAELVFCILGDVSDRWMCTAALASRAVLLTVS
EVGAVSLWSSATGKLQGRQHLSSVREETPTCGVSVQKQGKMVTGFSKGSISWVSPEGDSL
LEKLPEAVRFLVLSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDIVETASFGPE
NNLIITGSRDALIQVWSLSEQGTLLDILEGVGAPTSLLAWGGALVASASQQSSSFKVWDL
TDVQKPRACTPFLDRTGLTAVSHNGGYVYFPKIGDKNKVTIWDSAEGEEQDALDTSSEVR
CLEVAQRANLLFTGLVSGVVLVFPLHSRQDVMCIPPPEARKAVNCMALSTGEERLAIAYD
SIVLVLDISPGDPCPVIDGPTYTFYTQLPETIASVAVLADYRVIYGMTNGDLFLYECANS
KVFPLEAHGSQVACMQVSHQEQLAVSGSEEALLCLWDLQACKWRFQMNYTNSYCRGVQCV
CFSMDDNYVYAGLKDRSIIVWSVLDGTLLAVQFVHAVVNRIIPTSNGFIAPTRHGYLIRE
RFQCPSSRTLQQAPLKNFKKAVWKVKSRQREELAAAAGAHQGSRSASAQRNECKSNKRSQ
VCLLV
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaacgagaagctctgcagagcacggccttccccgaagttcaaaccttctgc
caaaagcacgggctcatgttcgaggttgttgatctgaggtggggtattcagaacactgag
gccactgaccacatgaccacagaactctgcttggaggagctcgaccgatgtcggaaaaca
tccataggccccgcttttgttgccctcttaggtgaccagtacggcccctgtccagtcccc
acgctgatcgaggagaaggagtgggaggctctgagagcccagctgacctccaggccacgc
gacctggagctggtggctcgacgcttccggagggacgagaacgctgtgccccccacctac
ctgttgcaggcgctaggcaccgtggaggcccacgggcccgaagaggtcacgctgacttct
gtgctgcgctccggagcccaggaggcccggaggctgggcctcatcacccaggagcagtgg
caccgctaccactggtcagtcattgaatgggagatagaccggggcctgctgagcttgaca
gacggagaccagggggcgaccatcttcttgagagagatccaagacctcaacaaacacatc
ctggaagactgcgccctcaagatggtggaccggctcgcagacggctgcctggacacggat
gcccagaaccttctcagtggcctcaagggacgcattgccgacgtgcaacccggagtcctc
aaggctcaccacctgccatggagccgagacctggtgaaccccaaaaacaaggctcatgct
cggtacctgaaggagctgggggagcagtttgtggccagggctaaccaccaggtccttgag
cacctccaggagctggaggcgggccggcaggagctggcgtggctctaccaggagatccgc
caccacctggggctgagcgccgaagccacccggatcttctgcgggcgccaggagctcctg
gcccagctggggcagcggctccggcagagcgacgggcggccgcactcacccctggtgctt
tttgggcccccaggcattggaaagacagctctgatgtgcaagctggcggagcagataccg
ggactgcttggccgcaagacggtgaccgtcctgcggcttctggggacgtcccagatgagc
accaacgcccggggcctcctccagagcatctgcttccagctctgcctggcctacgggctg
cccctgcccccggcccaggtcctggaggcccacgccagggtggtccagttcttccacacc
ctcctccacactgtctcctgccgaaacttcgagtccctggtgatcctgttggactccgtg
gatgatgtggattccgtccgccgcgcccgcagggtcccctggctgcctcccaaatgccct
ccgagggtccacctcatcctctcagtctgctcagggtggcagggggttctcgacaccatg
cgacagacgctgacagacccagaggcctactgggaggtgaagcccctctctggaaaccaa
gggcaagagatgatccagctcctgctggcatcctcgaggaggacgctgagcccagagcag
agggatctgctctgggccagcctcccagagtgtgggcacccgggacggctgaggctggcc
ttcgaggaggcccggaaatgggcctccttcaccatacctgcccctctggcctccaccgct
agggaagcaatgcaccaactgtgtgcccggctggagcagacacacgggcagctcctggtg
gcccacgtgctgggctacatcgtgtcttcccggcatgggctctcggaggcagagctgaag
gacgtcctgtccttggacgacgaggtcctgcaggtggtgtaccaggactggagcccgccc
agcaaggagctgttgcgtttcccacccctgctgtgggtgaggctgcgccgggatctgggc
cactgtttggcccggcggcccgtggatggcttcacgctcctggccatcgcccacaggcag
ctggccgaggtggtccaagagcgctacctgcctgggcccgagagagccaagaggcacgga
gtcttggctgacttcttctcgggggcctggagccagggcaccaagaaactcatcactctg
ccactggtggggaagcccctgaacctggaccgtaaggtggcccctcagcccctgtggttc
tcagacacggtggcaaatctgcggaagctgaaggagttgccccatcacctggtgcactca
ggccgcatcgaagagctgaaacaggaggttctgggcagcatgaactggatttcctgccgg
ggcatctctgggggcatcgagggcttgttggacgactttgacctgtatgcccctcacctg
gactgtcccgaggtcagcctggtccgggatgccctccagctgtgccgcccggctgtggag
ctccgaggcatggagaggagcgtcctgtatacagaactcctggccagactccatttcttc
gccgcctcacatccagcactggtgggacagctgtgccaacaggcccagagctggttccgg
gtgtgcccccaccctgtgctcatacccctcgggggattcctgcagcccccgggaggaccc
ctccgggcaaccctcacaggctgtcacaagggcatcactgccatggcatggagcctggag
gagaagcttctggttgttggctgccaggacggcatcgtggctgtgtgggacatgggagaa
cagcaagtgattcacatcctaactggacacacaggagaggtgaggtgtgtggaggtgttt
gccaaagggacgctcgccctctctgcctcaaaggaccacacactgcgtttgtgggattta
ctctctgggcaggagaaattcaccatttgggatggaggttcaaaatctcccactgaccct
gagatctggagtcttcacatggatgaagcaaagaaggttgtgtatgtggcatctggctca
aaggtcagtgcttggaatctggaaactgcagagctggttttctgtatcctgggagacgtc
tccgaccgatggatgtgcacagcggcgctggcttctcgggcggtgctgctgaccgtgtct
gaggttggcgcggtcagtctgtggagctcagccacaggaaaactgcaggggaggcaacat
ttgtccagtgtcagagaagaaacacctacctgtggggtctcagtccagaagcagggcaag
atggtgacggggtttagcaagggctccatctcttgggtttcccccgaaggagacagcctg
ctggagaagcttccggaagccgtgaggttcctggtactctctgaagacgagtcccttctt
gctgcagggtttggaagatctgtgcggatattcttggccgactcacaggggtttcatcga
ttcatggccaccgaccttgaacacgaggacatagtggagacagccagttttggtcctgag
aacaatctgattattactggatctcgggacgcactcattcaggtgtggagtctgtcagag
caggggaccctgctggacattctggaaggcgttggggcccccacgagcctgctggcctgg
ggtggggccttggtggcatctgcttcccagcagtcctcatcttttaaagtctgggatctc
accgacgttcagaagccgagggcctgcaccccgtttctggatcgcaccggcctcactgca
gtgtcacacaatggaggctacgtttatttccccaagattggtgacaagaacaaagtcacc
atttgggactcagcggaaggggaggaacaagatgccctggacacctccagtgaggtcagg
tgtctggaggttgcccagcgggccaatctccttttcaccggcctcgtttcgggggtggtc
ctggtgttccctctgcattccagacaggatgtgatgtgcattccccctcccgaggcccgg
aaagccgtcaactgcatggcccttagtaccggcgaggagcgcctggccatcgcctatgac
agcatcgtcctggtgctggacatcagccccggggatccctgtcccgtcatcgacgggccg
acctacaccttctacacccagctgcctgagaccatagccagcgtggctgtgctggccgac
taccgcgtgatctatggcatgaccaacggtgacctcttcctctacgagtgtgcgaactcc
aaagtgttccctctggaggcccacgggagccaggtcgcctgcatgcaggtcagccaccag
gagcagctggcggtcagcgggtccgaggaagccctgctgtgtctctgggacctgcaggcc
tgcaagtggaggttccagatgaactacacgaattcttactgtagaggagtccagtgtgtc
tgcttctccatggatgacaattatgtgtatgcgggcttgaaggatcgctccatcatcgtc
tggagtgtactggatggcaccctcctggctgtccagtttgtccacgctgtggtgaacagg
atcattccaacttccaatggattcatcgcccccactagacatggctatctcatccgcgag
cgtttccagtgcccttcatcaaggacgttgcagcaggcccctctcaagaacttcaagaag
gcagtgtggaaggtcaaatccagacagagggaagagctggcagctgctgcaggagcacac
cagggctcaagatcagcaagtgcccagagaaatgaatgcaaatcgaacaaacgttcacaa
gtctgcctgctagtgtag
DBGET
integrated database retrieval system
