Ailuropoda melanoleuca (giant panda): 100473183
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Entry
100473183 CDS
T01329
Symbol
ACAN
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein
KO
K06792
aggrecan 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aml00535
]
100473183 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100473183 (ACAN)
04091 Lectins [BR:
aml04091
]
100473183 (ACAN)
Proteoglycans [BR:
aml00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
100473183 (ACAN)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
100473183 (ACAN)
Lectins [BR:
aml04091
]
C-Type lectins
Lecticans
100473183 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_CA
I-set
Ig_3
EGF_3
ig
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
100473183
NCBI-ProteinID:
XP_034523779
Ensembl:
ENSAMEG00000012806
LinkDB
All DBs
Position
9:complement(6501001..6565566)
Genome browser
AA seq
2542 aa
AA seq
DB search
MTTLLLVFVTLRVITAASSLEASDPDNSLSVSIPEPSPLRVLLGSSLTIPCYFIDPTHPV
TTAPSTAPLAPRIKWSRISKEKEVVLLVATEGQVRVNNAYQDKVSLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMQGIEDSEATIEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQGGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPEN
FFGVGGEEDITIQTVTWPDMELPLPRNVTEGEARGNVILTVKPIFGVSPTVPEPEEPFTF
VPEPEEPFTFAPDRGATAFPEAENRTGETAGPWGVPATPSPAFTAFTSEDHVVQVTAVPG
ATEVSGRPRLPGGVVFHYRPGSARYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQC
DAGWLQDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPPSETYDVYCYVDRLEGEVFFVT
RLEQFTFQEALAFCESHNATLASTGQLYAAWSQGLDKCYAGWLSDGSLRYPIVTPRPSCG
GDKPGVRTVYLYPNQTGLPDPLSRHHAFCFRGVSAAPSPGEEEGGTPTPSVVEDWIATQV
GPGVAAVPVGEETTAIPGFTIEPANQTEWEPAYSPAGTSPPPGIPPTWPPTSAATEEGTE
GPSGTEVPSVSEEPFPSEEPSPSEEPFLWEELSTLSPPVPSGTELPGSGEPSGVPEVSGD
FTGSGEVSGRLDSSGQPSGESASGLPSEDLDSSGLTSAVGSGLPVGSGLASGDEDKITWS
GIPEVGGEGLETSASGVEDLSRLPSGEGPEIPPSGVEDLSGLPSGEGPEVSASGVEDLSG
LPSGEGLEVSASGVEDLSRLPSXEGPEVSVSGIEDLSGLPSGEGLEVSASGVEDLSRLPS
GEGPEVSASGVEDLSGLPSGEGPEVSASGVEDLSRLPSGEGPEVSASGVEDLSGLPSGEG
PEVSASGVEDLSRLPSGEGPEVSASGVEDLSGLPSGEGPEVSASGVEDLSRLPSGEGPEV
SASGVEDLSGLPSGEGPEVSASGVEDLSRLPSGEGPEVSASGVEDLSGLPSGEGPEVSAS
GVEDLSRLPSGEGPEVSASGVEDLSGLPSGEGPEVSASGVEDLSRLPSGEGPEVSASGVE
DLSGLPSGEGLEVSASGVEDLSRLPSGEGPEVSASGVEDLSRLPSGEGPEVSASGVEDLS
GLPSGEGPETSTSGVEDLSGLPSGVEGHPETSASGVEDLGELPSEKEGIETSTSGVGDLS
RLPSGEGPETFASGVGDLSGLPSGEGPEVSASGVEELSGLPSGREGIETSTSGVGDLSRL
PSGEGPEVSVSGVEDLSGLPSGEVPEPSASGVEDLSGLPSGREGLETSASGVGDLSGLPS
GEGPEGSASGIGDLSRLPSGREGLETSASGVEDLSGLPSGVEGHPETSASGVEDLGELPS
GGEGLETSVSGAEDLSGSPSGKEDLIGSASGSLDFGRIPSGTLGSGQAPEASGLPSGFSG
EYSGVDLGSGPSSGLPDFSGLPSGFPTVSLVDTTLVEVVTTTRASELEGRGTVGISGAGE
TSGLPFSELDISGAVSGLPSGAELSGQASGSPDISGETSGFFGVHGQPSGFPDISGGASG
LFEVSGQPSGFSGETSGVTELSGLPSGQPDVSGEASGVVSGGGQPFGITDLSGETSGVPD
ISGQPSGLPEISGTTSGVPDLVSSTMSGSGDSSGITFVDTSLMEVTPTTFKEEEGLGSVE
VSGLPSGEADLSGASGIMDVSGQSSGGIDSSGLTSHPPEFSGLPSGVAEVSGESSGAETG
SSLPSGAYDGSGLPSGLPTVSLVDRTLVESVTQSPTAQEAGEGPSGILELSGAHSGAPDV
SGDHSGVLDLSGQQSGLVEPSGEPSSTPYFSGDFSGTMDVSGESSAATSTSGEASGLPEV
TLITSEFVEAVTAPTVSQELAQRPPVTHTPQLLESSGEASASGEISGATPGFPGSGLEAS
SIPESSSKTSDFPEAGVGASVAPEASGQASGAPDVGEATSAFPEADVEGASGLGVNGGTS
AFPEGPREGSASPEVREEPTTSAYAVGTEASGWPSATPVASGDRTEVSGDLSGHTSGLDV
VISTSVPESEGVPQSQRPAEAPLEIESSSPLHSGEETQTAETAETATSPTDVSVPASPAR
TDESAPTVPDIDECLSSPCLNGATCVDAIDSFTCLCLPSYRGDLCEIDQELCEEGWTKFQ
GHCYRYFPDRESWVDAESRCRAQQAHLSSIVTPEEQEFVNNNAQDYQWIGLNDRTIEGDF
RWSDGHSLQFENWRPNQPDNFFVSGEDCVVMIWHEKGEWNDVPCNYYLPFTCKKGTVACG
DPPVVEHARTFGQKKDRYEINSLVRYQCTEGFVQRHVPTIRCQPSGHWEEPRITCTDPST
YKRRLQKRSPRAPRRSRPSTAH
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcttggtgtttgtgactctgagggtcatcacagcagccagctcacta
gaagcttcagaccctgacaactcgctgagtgtcagcatccccgaaccgtcccctctgcgg
gtcctcctggggagctccctcaccatcccttgctacttcatcgaccccacgcaccctgtg
accaccgccccctccaccgcccccctcgccccgagaatcaagtggagccgtatttccaag
gagaaggaggtggtgctattggtagccacggaagggcaggtgcgggtcaacaatgcctac
caagacaaggtctcgctgcccaactacccggccatccccagtgatgccaccttggaaatc
cagaaccttcgctccaatgactcggggatctaccgctgcgaggttatgcaaggcattgag
gacagcgaggctaccatagaggtcgtggtaaaaggcattgtgttccattacagagccatc
tccacacgctacacgctggactttgacagggcacagcgggcctgcctacagaacagtgcc
atcatcgccacccctgaacagctgcaggccgcctatgaggacggcttccaccagtgtgac
gccggctggctggccgaccagactgtcaggtaccccatccacactccgagggaaggctgc
tatggggacaaggatgagtttccgggcgtgaggacctacggcatccgagacaccaatgag
acctatgatgtctactgcttcgctgaggagatggagggtgaggtcttctatgcgacatct
ccggagaagttcaccttccaggaggcagccaacgagtgccggcggctgggcgcgcggctg
gccaccacgggccagctctacctggcctggcagggcggcatggacatgtgcagtgctggc
tggctggccgaccgcagtgtgcgctaccccatctccaaggcccggcccaactgcgggggc
aacctcctgggcgtgcggaccgtctacctgcatgccaaccagacgggctaccccgacccc
tcgtcccgctacgacgccatctgctacacaggtgaagactttgtggacatcccagaaaac
ttcttcggggtgggcggcgaggaggacatcaccatccagacagtgacctggcctgacatg
gagctgcccctgccccgaaacgtcaccgagggtgaagcccgaggcaacgtgatcctcact
gtgaaacccatctttggtgtctcccccactgtcccggagcccgaggagcccttcacgttt
gtcccggagcccgaggagcccttcacgtttgcccccgatagaggggccactgccttccct
gaggctgagaacaggactggagagaccgccgggccctggggtgttcccgccacgcccagc
ccagccttcaccgccttcaccagtgaggaccatgtcgtgcaggtgaccgcagtcccaggc
gcaaccgaggtttcggggcggccacgattgccagggggggttgtgttccactaccgccca
ggctccgcccgatactcactgacctttgaggaggctcagcaggcctgtctgcgcactggg
gccgtcatcgcctctccggagcagctccaggccgcctatgaagcaggctacgagcaatgt
gatgctggttggctgcaggaccagactgtcagataccccattgtgagcccacggaccccg
tgtgtgggtgacaaagacagcagcccaggggtcaggacctacggtgtgcggccaccatca
gaaacttatgatgtctactgctacgtggataggctcgagggggaggtgttctttgtcaca
cgcttggagcagttcaccttccaggaagccctggcattctgtgaatctcacaacgccacc
ctggcctccacgggccagctctacgccgcctggagccaaggcctagacaagtgttatgcc
ggctggctgtcggacggcagcctacgttaccccatcgtcaccccgaggccctcctgcggc
ggagacaagccaggcgtgagaactgtctacctctaccccaaccagacgggcctcccagac
ccgctgtcccggcaccacgccttctgtttccgaggtgtctcagcagcgccctccccagga
gaagaagagggtggcacacccacgccctctgtcgtggaggactggatcgctacccaagtg
gggcctggtgtggctgctgtgcccgtgggggaggagacgaccgcaatcccaggcttcacc
attgagccagcaaaccagacggaatgggaaccagcctacagcccagcgggcacttcccca
ccaccagggatccctccaacatggcctcccaccagcgcagcaacagaggagggcacagaa
ggaccttctggaacggaagtgccctcagtctcagaggagccattcccctcggaagagcca
tctccctcagaggaaccattcctctgggaggaactgtccacactttcacccccagtgccc
agtgggactgagctaccgggctctggggagccatccggggtacctgaagtcagtggtgac
ttcacaggcagcggagaagtttcaggacgtctggactccagtgggcaaccctcaggggaa
agtgcaagtggactgccctctgaagatcttgactccagtgggctcacctctgctgtgggc
tcaggcctgcctgtgggaagtggactggcctcaggggatgaagataaaattacatggtcc
ggcattcctgaagttggaggtgagggcctagagacctctgcctctggagtagaggacctc
agcaggctgccttctggagaaggtccagaaattcctccctctggagtagaggacctcagt
ggattaccttctggagaaggtccagaagtctctgcctctggagtagaggaccttagtgga
ttaccttctggagaaggcctagaagtctctgcctctggagtagaggacctcagcaggctg
ccttcgnnagaaggtccagaagtctctgtctctggaatagaggaccttagtggattacct
tctggagaaggcctagaagtctctgcctctggagtagaggacctcagcaggctgccttct
ggagaaggtccagaagtctctgcctctggagtagaggacctcagtggattaccttctgga
gaaggtccagaagtctctgcctctggagtagaggacctcagcaggctgccttctggagaa
ggtccagaagtttctgcctctggagtagaggaccttagtggattaccttctggagaaggc
ccagaagtctctgcctctggagtagaggacctcagcaggctgccttctggagaaggtcca
gaagtttctgcctctggagtagaggaccttagtggattaccttctggagaaggcccagaa
gtctctgcctctggagtagaggacctcagcaggctgccttctggagaaggtccagaagtt
tctgcctctggagtagaggaccttagtggattaccttctggagaaggcccagaagtctct
gcctctggagtagaggacctcagcaggctgccttctggagaaggtccagaagtttctgcc
tctggagtagaggaccttagtggattaccttctggagaaggcccagaagtctctgcctct
ggagtagaggacctcagcaggctgccttctggagaaggtccagaagtttctgcctctgga
gtagaggaccttagtggattaccttctggagaaggcccagaagtctctgcctctggagta
gaggacctcagcaggctgccttctggagaaggtccagaagtctctgcctctggagtagag
gaccttagtggattaccttctggagaaggcctagaagtctctgcctctggagtagaggac
ctcagcaggctgccttctggagaaggtccagaagtctctgcctctggagtagaggacctc
agcaggctgccttctggagaaggtccagaagtttctgcctctggagtagaggacctcagt
ggattaccttctggagaaggtccagaaacctctacctctggagtagaggacctcagtgga
ttgccttctggagtagagggtcatccagagacttctgcttctggagtagaggacctcggt
gaacttccttctgaaaaagaaggaatagagacctctacctctggtgtaggggacctcagc
aggttaccttctggagaaggtccagaaacctttgcctctggagtaggggacctcagtgga
cttccttctggggaaggtccagaagtctctgcctctggagtagaggaactcagtggactt
ccttctggaagagaaggaatagagacctctacctctggtgtaggggacctcagtaggttg
ccttctggagaaggtccagaagtctctgtctctggagtagaggacctcagtgggctgcct
tctggagaagttccagaaccctctgcctctggagtagaggaccttagtggacttccttct
ggaagagaaggtctagagacctctgcctccggtgtaggggacctcagtgggttgccttct
ggagaaggcccagaaggctctgcttctggaataggggacctcagtagacttccttctgga
agagaaggtctagagacctctgcttctggagtagaggacctcagtgggttgccttctgga
gtagagggtcatccagagacttctgcttctggagtagaggacctcggtgaacttccttct
ggaggggaaggtctagagacctctgtctctggagctgaggatctcagtgggtcgccctct
gggaaagaggacttgattgggtcagcttctggatccttggactttggcagaataccttct
ggaactctgggaagtgggcaagctccagaagcaagtggccttccctctggatttagtggt
gagtattcaggggtggaccttggaagtggcccatcctctggcctacctgattttagtgga
cttccttctggattcccaactgtctccctagtggatactacattggtggaagtggtcaca
accaccagggcaagtgaactggaagggaggggaactgttggcatcagtggtgctggagaa
acatctgggctgcccttcagtgagctggacattagtggggcagttagtggactcccttca
ggagctgaactcagtggccaagcatctgggtctcctgacatcagtggggaaacatctgga
ttctttggtgtccatggacagccatcggggtttcctgacatcagtgggggagcatctggg
ctttttgaggtcagtgggcagccatcagggttttctggggaaacatctggagtgaccgag
cttagtggactgccctctggacaaccagatgtcagtggagaagcctctggagttgtttct
ggcggtggtcaaccatttggcataaccgacctgagtggggaaacatctggggtccctgat
atcagtgggcagccatcaggattgccagagatcagcgggacaacttctggagtccctgac
ctggtttccagtaccatgagcggcagtggtgactcttctggcattacgtttgtggacacc
agtttgatggaagtgaccccaactacgtttaaagaagaagaagggttagggtctgtggaa
gtcagtggactcccttcaggggaggcagatctttcgggcgcatctgggatcatggatgtc
agtggacagtcttctggaggaatcgactccagcgggttgacatcccaccctccagaattc
agtggcctgccaagtggagtagctgaagtcagtggagaatcttctggagcagagactggg
agcagcttgccttcaggagcctatgatggcagtggactcccatccggtctccccactgtg
tctcttgtggacagaactttggtggaatctgtcacccagtctccaacagcccaagaagca
ggagaagggccttcgggcattttggaactcagcggtgcccattctggagcaccagatgtg
tctggagaccattcgggagtgttggacctaagtgggcagcagtccgggctggtggagccc
agtggagagccgtcaagtactccatattttagtggggacttttctggcaccatggatgta
agtggagaatcctctgcagccacgagcaccagcggggaggcctcaggacttccagaagtt
actttaatcacttctgagttcgtggaggctgtcactgcaccaactgtttcccaggaactc
gcccaaagaccccctgtgacacacaccccccagctgttggagtccagcggagaagcctcc
gcgtctggggaaattagtggggctacaccagggttccccgggtctgggctagaagcgtca
tccatcccggaatccagcagcaagacgtccgactttcctgaggctggggtgggggcatct
gtcgcccctgaggccagcggacaagcttctggggcccctgatgtgggtgaagccacctct
gccttccctgaagctgatgtggagggagcctcaggcctgggagtgaacggcggcacctca
gcctttcctgaaggccccagggagggctcggccagcccggaagttcgggaggagccaacc
accagcgcctatgctgtgggcacagaggcgtcaggctggccttcagccactccggtggca
tctggagacaggactgaagtcagcggagacctgtctggtcacacgtcagggctggatgtt
gtcattagcactagcgtcccggagtccgagggggtcccgcaaagccagcgccctgcagag
gcacctctagaaatcgagtcctcaagccccttgcactcaggagaagagacccaaacagcc
gaaacagccgaaacagcgacatcccccacagatgtctccgtccctgcgtctccagccagg
accgatgaatctgcaccaacagtcccagacattgatgagtgcctctcaagtccttgtctg
aatggagccacctgcgtggacgccatcgactctttcacatgcttatgccttcccagctac
cgaggggacctgtgtgagattgaccaggagctgtgtgaggagggctggaccaagttccag
ggccactgctaccgttacttccccgaccgcgagagctgggtggatgccgagagcaggtgc
cgggcacagcaggcccacctgagcagcatcgtcacgcctgaggagcaggagttcgtcaac
aacaacgcccaagactaccagtggataggcctgaatgacaggaccatcgaaggggacttc
cgctggtcagatggacactccttgcaatttgagaactggcgccccaaccagcctgacaac
ttcttcgtgagtggagaggactgcgtggtgatgatctggcatgagaagggagagtggaac
gacgtgccctgcaattactacctgcccttcacgtgtaaaaagggcacagtggcttgcgga
gacccccccgtggtagaacacgccaggacctttgggcagaagaaggaccggtacgagatc
aactcgctggtgcggtaccagtgcacagaaggctttgtccagcgccacgtgcccaccatc
cggtgccagcccagtgggcactgggaggagcctcggatcacctgcacagacccctccacg
tacaagcgcagactgcagaagcggagcccgcgggcgccccggaggagccggcccagcaca
gcccactga
DBGET
integrated database retrieval system
