KEGG   Ailuropoda melanoleuca (giant panda): 100473204
Entry
100473204         CDS       T01329                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100473204 (KDM4A)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100473204 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100473204 (KDM4A)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100473204 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 Tudor_5 53-BP1_Tudor LBR_tudor DUF4537
Other DBs
NCBI-GeneID: 100473204
NCBI-ProteinID: XP_002925602
Ensembl: ENSAMEG00000001188
UniProt: D2HSQ5
LinkDB
Position
2:20098151..20142468
AA seq 1066 aa
MASESETLNPSARIMTFYPTMEEFRNFSRYMAYIESQGAHRAGLAKVVPPKEWKPRASYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKESELP
PRARNEECPEEDDMEGLEDGEEGDLKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEEL
SPGQYDVTECQAALAPVRPTHSSVRQVDDALPFPDYSDSSEVKFEELKNVKLEEEDEEEE
EEQEAAALDLSVNPASIGGRLVLSGSKKKSSSSLGSSSSRDSISSDSETSEPLSCRAQGQ
SGVLTVHSYAKGDGRVTMGEPCMRKKGGATGSISERELAEVADEYMFSLEENKKSKGRRQ
PLSKLPRHHPLVLQDCVSDDESSEQLAPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFN
ETMAQQAPHCAVCMIFQTYHQVEFGGLSQSCGNASALAPQKQRTKPLIPEMCFTSTGCST
DINLSTPYLEEDGTSLLVSCKKCSVRVHASCYGVPPAKASEDWMCSRCSANALEEDCCLC
SLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRK
RTAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQS
ITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPA
EGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRL
SVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggcttctgaatctgaaactctgaatcccagtgctcggataatgaccttttacccaacc
atggaggagttccgaaacttcagtcgatacatggcctacattgaatcccaaggagctcat
cgcgctgggctggccaaggtcgttcctccaaaggagtggaagccacgagcatcctatgat
gatattgatgatctggtcattcctgcccccatccagcagctggtgactgggcagtctggc
ctcttcactcagtacaacatacagaagaaagccatgactgttcgcgagttccgcaagata
gccaatagtgataagtactgtacaccacgctatagtgagtttgaagagcttgaacggaaa
tactggaaaaatctcacattcaatcccccaatctatggtgcagatgtgaatggcactctc
tatgaaaagcatgtggatgagtggaatattggccggctgaaaacaatcctggacttggtg
gagaaggagagtgggatcaccattgagggtgtgaacaccccgtacctgtactttggcatg
tggaagacctcctttgcctggcacactgaagacatggacctctacagcatcaactacctg
cacttcggagagccaaagtcctggtactctgttccccctgagcatggaaagcggttggag
cgcctcgccaaaggttttttccctggaagtgctcaaagctgcgaggcttttctccgccac
aagatgaccttgatttcccctttaatgctgaagaaatacggaattccctttgacaaggtc
actcaggaagctggagaattcatgatcactttcccttatggttaccatgctggctttaac
catggcttcaactgtgcggagtccaccaattttgctacccggcggtggattgaatatggc
aaacaagctgtgctgtgctcctgtaggaaggacatggtgaagatctccatggacgtgttt
gtgaggaagttccagccagaaaggtacaaactttggaaagctgggaaagacagcacagtt
atcgaccatactctgcccacgccagaagcagctgagtttcttaaggagagtgaactgccc
ccaagagccagaaacgaggagtgtccagaagaagatgacatggaaggacttgaggatgga
gaggagggtgacttaaagagaagccttgccaaacatcgtatagggacgaagaggcaccgg
gtttgtcttgaaataccacaggaggtgagtcagagtgagctcttccccaaggaggagctg
agtcccggacagtacgatgtgacggagtgccaggctgccctcgctcccgtgaggcccacc
cacagctctgtgcggcaagtcgacgatgctcttcccttcccagattattctgactcttct
gaagtcaaatttgaagagcttaaaaatgtcaaactggaagaggaggatgaggaggaagag
gaggaacaagaagcagctgccttggatctttctgtgaatcctgcttctatagggggacgc
ctggtcctctcaggttcgaaaaagaagtcatcttctagcctgggctccagttcttcacgg
gattctatttcttctgattcagaaaccagtgagcctctgtcctgccgagcccaagggcag
tcgggagttctcactgtgcacagctatgccaaaggggacggcagggtcaccatgggagag
ccctgcatgcggaagaaaggtggtgccaccggaagtatcagtgagcgggagctggcagag
gtggcggatgaatacatgttttccctggaggagaataagaagtccaagggccgtcgtcag
cccttaagcaagctcccccgtcatcacccactcgtgttgcaggattgcgtcagtgatgat
gagtcatctgaacagctggcccctgaggaggaggctgaggagacagaggcctgggccaag
cccctgagccaactatggcagaaccgacccccgaactttgaggctgaaaaggaattcaat
gagactatggcccaacaggcccctcactgcgctgtctgtatgatatttcagacgtaccat
caggttgagtttggaggccttagtcagagctgtggaaatgcttcagctctagccccccag
aagcagaggaccaagccattgattccagaaatgtgtttcacctccactggctgcagcacg
gacatcaacctttctaccccttaccttgaggaggacggcaccagccttctggtttcctgc
aagaagtgcagtgtccgcgtccatgccagttgttacggggtccccccggcaaaggcttct
gaagactggatgtgttctcggtgttcggccaatgccctggaggaggattgctgtttgtgc
tcattacgagggggagccctacagagagccaatgatgacaggtgggtccacgtctcgtgt
gctgtggcaattttggaagcaaggtttgtcaacattgccgaaagaagtccggtggatgtg
agcaaaattcccctgccgcgcttcaaactgaaatgcgtcttctgcaagaagcggaggaaa
agaaccgctggctgctgtgtgcagtgttctcacggccgctgcccgactgccttccacgtg
agctgtgcccaggctgcgggggtgatgatgcagcccgatgactggccttttgtcgtcttc
attacctgctttcggcacaagatccctaatctggagcgtgccaagggggccttgcagagc
atcactgcaggccagaaggtcattagcaagcacaagaatgggcgcttctaccagtgtgag
gtggtcaggctcaccaccgagaccttctatgaagtcaactttgatgatggttccttcagc
gacaatctctatcctgaggacatagtgagtcaggactgtctccagttgggtcctcctgct
gaaggagaagtggtccaagtgagatggacagatggccaagtctacggagccaaatttgtg
gcctcccaccccatccagatgtaccaggtggagtttgaggatggctcacagcttgtggtt
aagagagatgacgtgtacacactggacgaagagcttcccaagagagtcaagtccagactg
tccgtagcctcagacatgcgcttcaatgagattttcaccgagaaggaagttaagcaggaa
aagaaacggcaacgagtgatcaactcaagataccgggaagattacatcgagcctgcacta
taccgagccatcatggagtag

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