Ailuropoda melanoleuca (giant panda): 100473229
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Entry
100473229 CDS
T01329
Symbol
CDH17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
100473229 (CDH17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100473229 (CDH17)
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Major cadherins
100473229 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
RET_CLD1
RibLong
SsfX3_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100473229
NCBI-ProteinID:
XP_034524757
Ensembl:
ENSAMEG00000012449
LinkDB
All DBs
Position
9:complement(62678587..62743278)
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AA seq
831 aa
AA seq
DB search
MVQVSLHCLCFLTLYLATGYSQERKFSGPLEPMTFSIFEGQEASQVIFQFKASPPAVNFK
LTGETDGIFQIQPDGLLYHNKALDRETRAVHKLQVSALDAQGTVVEGPVPITIEVKDIND
NRPTFLQKKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLIYEIVIQLPKINNIMYFQ
VNNKTGAISLTLDGSRALDPSKNSNYNLVVSVKDMGGQNENSFSDSTSVDIVVKENIWKK
PEPVEIFENSTDPHPIKITQVQWNEPGARYILVDKEKLPRFPFSIDQEGVIYVTQPLDRE
EKDSYVFYAVAKDEAGQPLSYPLEIRVKVKDVNDNPPTCPSAVTVFEVQENENIGSNIGT
FIAHDKDEENTANSVLVYRIVDQVPALPKEGLFLVQTYSGVFQLAEQSLKKQDTPQYNLT
VEVADKDFKTLCHVQIHVIDINDQIPIFEKSDYGNLTVAEDTVVGSTILTIQATDGDEPF
TGSSKILYRITQGDSDGRLGVDTDPQTNAGYVIIKKPLDFETAAIHNIVFQGENPEPLVS
GVNYNSSSCATFKLIVTDVNEVPEFSQRVYQAKVSEDVAVGTKVGNVTARDPENLDISYS
LGDNRRGWLKINPVTGEISTVAPLDREAESVYRVQVVATEVGGSSLSSTAYFHLTLLDVN
DNPPRLAKDDPGLFLCHPLQATGTVIFEATDDDQQSFRGPRFDFSLGSDMLQNTWEVSSI
NGTHAKLRTKHTDFEERVYNIPIRINDRGQPPLEGIVSLPVTFCKCVEGSCFRAAGRQSG
MPTVGMAVGILLTTFLVIGIILAVVFIRIKKNEGKANVESAQASEAQPLKN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagtctcacttcattgcttgtgtttccttacactttatttggcaactggatat
agccaagagaggaagtttagtggacccctggaacccatgacattttccatttttgaaggc
caagaagcgagtcaagtcatattccagtttaaggccagtcctcctgctgtgaatttcaaa
ctaaccggagagacagacggcatatttcagatacaaccagatggacttctatatcataac
aaagccttggatagagaaacaagagctgttcacaaactccaggtctcagccctggatgct
caaggaactgtcgtggagggccccgttcccatcaccatagaagtgaaggacatcaatgac
aatcgacccacatttctccagaaaaagtatgaaggctcagtaagacagaattctcgccca
ggaaagcccttcatgtacgtcaacgcaaccgacctggatgacccagccactcccaatggt
cagcttatttatgaaattgtcatccagcttcccaagatcaacaacatcatgtactttcag
gtcaacaacaaaacgggggcgatttcactcaccctagacggatctcgggcactggatccc
agtaagaattctaactacaatctggtggtctcagtgaaggacatgggaggccagaatgag
aattctttcagtgacagcacatctgtggatattgtggtgaaggagaatatttggaaaaag
ccagaacctgtggagatttttgaaaactcaactgatcctcaccccatcaaaatcactcag
gtgcagtggaatgagccaggtgcacgatacatcttagttgacaaggagaaactgccaaga
ttcccattttcaattgaccaggagggagttatttatgtgactcagcccttggaccgagaa
gaaaaggattcgtatgtgttttatgctgtggcaaaggatgaagctggacaaccgctttca
tacccactagaaattcgtgtgaaagttaaagacgttaacgataatccgcctacgtgtcca
tcggcagtgactgtatttgaggtccaggagaatgaaaacatagggagcaatattgggact
tttattgcccacgacaaggatgaagaaaacactgccaacagtgttttagtgtacagaatt
gtggatcaagtccctgcattgcccaaggaaggactcttcctggtccagacctactcagga
gtgttccagttagctgagcagtctttgaagaagcaagacacgccgcagtacaacttaaca
gtagaggtggctgacaaggatttcaaaaccctctgtcatgtgcagatccatgttattgat
atcaatgaccagatccccatcttcgaaaaatcagattatggaaacctgaccgttgctgaa
gacacagtcgtggggtccaccatcttaaccatccaggccactgatggtgatgagcccttc
acggggagttctaaaatcctgtatcgtattacacagggagacagtgatggacgactgggg
gttgacacagatccccaaaccaatgctggatatgtcataattaaaaagcctcttgatttt
gaaacagcagccattcacaatattgtgttccaaggagaaaatcctgagcctttggtgtct
ggtgtaaattacaacagcagctcttgtgccacgttcaagcttattgtgacagatgtgaat
gaagtacccgaattttcccagcgtgtataccaagcaaaagtcagtgaagatgtggctgta
ggcactaaagtgggcaatgtgactgccagggatccggaaaatctggatataagttattcc
ctgggcgacaacaggagaggctggcttaaaattaaccccgtcactggcgagatctctact
gtggctccgctggacagggaagccgagagtgtgtatcgggtgcaagtggtcgccaccgaa
gtaggtggctcctccctgagctccacagcctatttccacctgaccctcttggatgtgaac
gacaacccccctcggctagccaaggacgacccaggcttgtttctgtgccaccccctccaa
gcaaccggaactgtcattttcgaggccactgatgatgaccagcagtcatttcggggtcca
cggtttgatttttcccttggtagtgatatgttacaaaacacctgggaagtttccagtatc
aatggaactcatgccaaacttcgcaccaagcacacggactttgaggagagagtttacaac
atcccgatccgcatcaatgatcgtggtcagccacccttggaaggaatagtctctttacca
gttactttctgcaagtgtgtggaaggaagctgtttccgggcagcaggtcgccagtctggg
atgcccacagtgggcatggcagttggtatactcctgaccacctttttggttattggtata
attttagcagttgtgtttatccgaataaagaagaatgaaggcaaagctaatgtcgaaagt
gctcaggcatccgaagcccaaccactgaaaaactga
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